Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2919 ATGGAGCAAGACATGGAGAAGAGAAAAGGAGATAGAAGTGAACAAAGTAATGAAGAGAAATGGGTGTATGATGGTTCTTTTGATTATAAAGGAAGAGTTCCTCTTCGCGCTTCGACCGGTGCATGGAAAGCTTCTCTCATTGTCATCATGGTTGAAATTAGTGAAAGGATGAGTCACTATGGAATTTCAATGAACCTTATAACTTACCTGACTGAAGTGATTCATGAAGACCTCAAAACAGCTGCTAAGAATGTAAACAACTGGTATGGAGTAACAACTCTAATGCCTCTGGTAGGAGGATTTGTTGCTGATGCGTACACCGGTCGGTTTTATATGGTCCAATTGTCATCCATAATATATATGATGGGGTTATGCCTGTTGACAATGTCTCAATACATCCCAAGTCTAAAGTCGTGCAATACGGAGATATGTCAACGGCCGAGGAAAGTTCACGAGGTGGTTTTTTTTCTTGCGATATACGCTAAATCCTTGGGAACTGGAGGATTTAGACCATGCTTACAAAGCTTTGGTGCTGATCAATTTGATGATGGTCATCTGGAAGAAATGAAGAAGAAACTGTCTTTCTTCAACTGGTGGAACTTTGGATTGTGCTTTGCAGTGTTGATTAGTTCCACATTGATTGTTTATGTTCAAGATGTTGTCAACTGGGGAGTTTCATCTCTAATACTTACTAGCTTTATGGCTATTGCTGTCATAACTTTCTGGGTAGGTAAGCCGTTTTACAGGTACCGAAAGACGGAAGGAAACCCTTTATTACCGATTTTACAGGTCCTAGTCGCGGCCATAAGGAAAAGGGGTTTGTGTTGTCCTTCAAATCCGGATTTATTGTATCAAGTTCCAATTTCTGATCAGTCCCAAGGAAGGCTTCTGAGCCATACCAGAAGATTCAGGTTTCTTGACAAGGCTGCAATAATCGAAGAGGAATACGTTGAGCAGGAAGTAAATCCATGGAGATTAGCAACATTGACAAGAGTGGAGGAAACAAAGCTTGTATTGAACATTGTTCCGATATGGATAACTTTGTTAGCATCTGGAGCATGTGGAGCACAAGGCACAACTTTCTTTGTCAGACAAGCCGCTGCGACGGATTTAAACATAGGCAACGGTTTCAAAATTCCGCCAGCTTCCCTAAATTCTGTTTCTGCCATTGGCACCTTAATCGGCGTCCCCATTTACGATAAGCTTTTTGTTCCAATTATGAGGAAAATCACCGGAAACGAAAGGGGCATCAGGGAAATAGAGGTAAACACTATGAGTGTATACTGGTTGATACCACAAAACTTGATCGCTGGCGTTGGCGATGCATTTTCTATGGTTGGTATGCAAGAGTATTTCTATGATGAAGTTCCTGACTCGATGAGAAGCTTGGGTTTGGCCTTGTATTTTAGTGTGTTTGGAATTGGAAGCTTCTTAAGCACATTTCTAATCATCGCTGTGGACTATGTCACAGCGAAGAATGGCAAGAGTTGGATTGGGAAGGATATAAATTCGAGTCGTTTGGATAAGTTTTATTGGTTATTGGCAGTTATAAGTTTTTTGAATGTGTTGGTCTTTCTCTTCATAGAAAAGAGGTACATTTATAAGAAAGTACAGATGAAAGCTATAGAAACTAATGGTTACAAGAGTGATGATGATGATGATAGTATCATGGAGGATACTAAGGTCTAG 1689 0.4038 MEQDMEKRKGDRSEQSNEEKWVYDGSFDYKGRVPLRASTGAWKASLIVIMVEISERMSHYGISMNLITYLTEVIHEDLKTAAKNVNNWYGVTTLMPLVGGFVADAYTGRFYMVQLSSIIYMMGLCLLTMSQYIPSLKSCNTEICQRPRKVHEVVFFLAIYAKSLGTGGFRPCLQSFGADQFDDGHLEEMKKKLSFFNWWNFGLCFAVLISSTLIVYVQDVVNWGVSSLILTSFMAIAVITFWVGKPFYRYRKTEGNPLLPILQVLVAAIRKRGLCCPSNPDLLYQVPISDQSQGRLLSHTRRFRFLDKAAIIEEEYVEQEVNPWRLATLTRVEETKLVLNIVPIWITLLASGACGAQGTTFFVRQAAATDLNIGNGFKIPPASLNSVSAIGTLIGVPIYDKLFVPIMRKITGNERGIREIEVNTMSVYWLIPQNLIAGVGDAFSMVGMQEYFYDEVPDSMRSLGLALYFSVFGIGSFLSTFLIIAVDYVTAKNGKSWIGKDINSSRLDKFYWLLAVISFLNVLVFLFIEKRYIYKKVQMKAIETNGYKSDDDDDSIMEDTKV* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2919 562 Gene3D MFS general substrate transporter like domains 13 542 IPR036259 -
Psa5g2919 562 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 24 418 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa5g2919 562 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 422 544 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa5g2919 562 SUPERFAMILY MFS general substrate transporter 38 531 IPR036259 -
Psa5g2919 562 Pfam POT family 421 494 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa5g2919 562 Pfam POT family 113 411 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa5g2919 562 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 422 544 - -
Psa5g2919 562 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 24 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2919 Psa-Chr5 225201070 225203431 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2919 5 538 Organic Solute Cotransporters AT3G53960 51.215 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2919 - - gmx:102670061 788.489