Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2916 ATGGATCAAGTAAAAGAGAATAGAAAGCAAGATACAAGAGAAGAAGAAAATGAACAAGAAAAATGGGTTCACGATGGTTCTGTGGATTTTAAAGGCAAAGTTCCTCTTCGTGCTTCAACTGGTGTTTGGATTGCTTCTCTCTTTGTCCTCACAATTGAATTTAGTGAAAGAGTGAGCTTTTTTGGAATAGCAGCAAATCTGATATCCTATCTTACTAAGGTGATGCATGAAGATCTGAAAACAGCAGCGAAGAATGTAAACTATTGGACAGGAACAACAACCTTAATGCCTCTGATTGGTGGATTTCTTGCCGATGCTTACACTGGTCGATTTCCTATGGTCTTGTTTTCTTCCCTTGTTTACCTCATGGGGTTAAGCCTATTGACACTGTCTCAATACATCCCAAGTTTAAAGCCATGCAACACAAAAACATGTCTTCAACCAAGAAAGCTTCATGAAGTAGTTTTCTTCCTTTCCCTTTACTGTATCTCCGTTGGAACTGGAGGACATAAACCATGCTTAGAAAGCTTTGGAGCCGATCAATTCGACGAAGATCACGTCGAAGAAAGGAAGAAGAAGATGTCTTTCTTCAATTGGTGGAGCTTCGCACTGTGTTTTGCATTGCTGCTTGGTGCGACTGTGATTGTTTATGTTCAGGATTTTGTTAGCTGGGGAGCTGCTTGTCTTATTTTAACAATTCTAATGGCTCTATGTATCATAGCTTTCTATGTTGGAAAGCCATTTTATAGGTATAGAAGGCCACAAGGAAACACATTAAAACCAATTTTACAGGTCCTAGTTGCAGCTATAAGGAAAAGGAAATTATCTTGTCCTTCAAATCCTGATCTGTTGTATGAAGTTCCAAAGTCAGATAACTCCCAAGGAAGGCTTCTTTCAAATACTAGCAATCTAAGGTTTCTCGACAAGGCTGCAATAATAGAAGACACACAAGCTCCTAAAAAAAAGAATCCATGGGGATTAGCAACAGTTACAAGAGTTGAAGAAACAAAGCTTATTCTGAACATAATTCCCATATGGTTAACATCATTAACAACAGGAATATGTCTAGCACAAGGTTCAACACTCTTTGTTAAACAAGCAGCTTCTATGAACTTGAAAGTAAATGACAGTTTCTCAATCCCACCAGCTTCTGTTTCCTCTGCATCAGCTTTTGGAATCTTAATATTTGTTCCAATATATGACAGAGTTATTGTTCCAATTATGAGAAAAATCACTGGTAATGAAAGAGGAATCAGCATCCTTAGAAGAATTTCCATTGGCATAGCATTTTCAGTCATAGTTATGATTGTTGCAGCATTAGTAGAAGCTAAGAGACTTAGAATGCATGAACATGAAATCTTGAGAACAGGGGAAACAGGGGAAAAGACTATGAGAATGAGTGTATTTTGGTTAGTACCTCAATATTTTCTTCTTGGCTTTGGTGATGCATTTTCTCTTATTGGTTTACAAGAATATTTTTATGACCAAGTTCCTGATTCAATGAGAAGCTTAGGAATGGCTTTATATCTTAGTGTGCTTGGAGTTGGAAGTTTCTTAGGCAGTTTCTTAATCATTATTGTGGATCATGTGACAGAAAAGAATGGAAAAAGTTGGTTTGGGAAGGATATAAATTCAAGTCGTTTGGATAGGTACTATTGGATGTTGGCTATTATTAATGCTTTGAATTTGTGTGCCTATATTTTCATAGCAAATAGGTATACTTATAAGAAGGTACAGAGGATTGGTAATGAAATTAATGATGGTAAGAGTGATGGAGTAGAGATCATGGCATGA 1794 0.3696 MDQVKENRKQDTREEENEQEKWVHDGSVDFKGKVPLRASTGVWIASLFVLTIEFSERVSFFGIAANLISYLTKVMHEDLKTAAKNVNYWTGTTTLMPLIGGFLADAYTGRFPMVLFSSLVYLMGLSLLTLSQYIPSLKPCNTKTCLQPRKLHEVVFFLSLYCISVGTGGHKPCLESFGADQFDEDHVEERKKKMSFFNWWSFALCFALLLGATVIVYVQDFVSWGAACLILTILMALCIIAFYVGKPFYRYRRPQGNTLKPILQVLVAAIRKRKLSCPSNPDLLYEVPKSDNSQGRLLSNTSNLRFLDKAAIIEDTQAPKKKNPWGLATVTRVEETKLILNIIPIWLTSLTTGICLAQGSTLFVKQAASMNLKVNDSFSIPPASVSSASAFGILIFVPIYDRVIVPIMRKITGNERGISILRRISIGIAFSVIVMIVAALVEAKRLRMHEHEILRTGETGEKTMRMSVFWLVPQYFLLGFGDAFSLIGLQEYFYDQVPDSMRSLGMALYLSVLGVGSFLGSFLIIIVDHVTEKNGKSWFGKDINSSRLDRYYWMLAIINALNLCAYIFIANRYTYKKVQRIGNEINDGKSDGVEIMA* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2916 597 Pfam POT family 113 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa5g2916 597 PANTHER OS03G0204700 PROTEIN 28 581 - -
Psa5g2916 597 Coils Coil 1 21 - -
Psa5g2916 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 28 581 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa5g2916 597 MobiDBLite consensus disorder prediction 1 21 - -
Psa5g2916 597 Gene3D MFS general substrate transporter like domains 14 581 IPR036259 -
Psa5g2916 597 CDD MFS_NPF5 43 575 IPR044739 GO:0042937|GO:0042938|GO:0071916
Psa5g2916 597 SUPERFAMILY MFS general substrate transporter 40 573 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2916 Psa-Chr5 225049150 225051224 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2916 6 591 Organic Solute Cotransporters AT3G53960 56.061 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2916 - - gmx:102660397 899.427