Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2885 ATGACTACTTCCTTGCTTTTCTTCTGCTTTCTACTCTCCACCATCTCTGTGATAACCACAGGTGTTGTTACAGATGGGAATGGAACAGGAACACAACTAATAATTGTAAACAACTGCAAAGAGAGTGTATGGCCAGGAATTCTCAGCAATGGAGGACAACCTTCAATTAAAGGAGGTGGATTCCACCTTCCAAGCGGCGAACAAGTTGTTCTCCATCTCCCTAACCATTGGGCCGGTCGAATCTGGGGGAGACAAGGCTGCTGTTTCGACGAAACAACCGGAAAAGGCACGTGTCAAACCGGAGACTGTGGAGGCCAATTGAAATGCAAGGGAACTGGCGGTGTTCCTCCAGCTACACTTGTTGAAATGACACTTGGAACCTCAGAATCACCTTTGCATTACTATGATGTTAGTTTAGTTGACGGTTTTAACCTTCCTATGTCAATGAAGGCTGTTGGTCTTGGTGTTGGTGGTGGTTGTGGTGATGCTTCTTGTGGAGCTGATTTGAACGGTTGTTGTCCTTCTTCACTTGTTGTCAAACATGATGGGAAAGTTGTGGGGTGTAAAAGTGCTTGTTTGGCTACAAAATCTGATAAGTATTGTTGCACTGGTGAATTTGCTGATCCAAAAAGTTGCAAACCAACTATGTTTGCTCGTGTTTTTAAGAGTGTTTGTCCTCGTGCTTATACTTACGCTTATGATGATTCAACTGGGCTTATGTCTTGTTTGGCAAATCGGTATGCCATTACATTTTGTCCTCCATGA 765 0.4379 MTTSLLFFCFLLSTISVITTGVVTDGNGTGTQLIIVNNCKESVWPGILSNGGQPSIKGGGFHLPSGEQVVLHLPNHWAGRIWGRQGCCFDETTGKGTCQTGDCGGQLKCKGTGGVPPATLVEMTLGTSESPLHYYDVSLVDGFNLPMSMKAVGLGVGGGCGDASCGADLNGCCPSSLVVKHDGKVVGCKSACLATKSDKYCCTGEFADPKSCKPTMFARVFKSVCPRAYTYAYDDSTGLMSCLANRYAITFCPP* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2885 254 PIRSF PR5 3 254 IPR001938 -
Psa5g2885 254 ProSiteProfiles Thaumatin family profile. 33 254 IPR001938 -
Psa5g2885 254 SMART tha2 33 253 IPR001938 -
Psa5g2885 254 ProSitePatterns Thaumatin family signature. 94 109 IPR017949 -
Psa5g2885 254 CDD TLP-PA 32 252 - -
Psa5g2885 254 SUPERFAMILY Osmotin, thaumatin-like protein 32 254 IPR037176 -
Psa5g2885 254 Gene3D Thaumatin 32 253 IPR037176 -
Psa5g2885 254 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Psa5g2885 254 PRINTS Pathogenesis-related protein signature 80 91 IPR001938 -
Psa5g2885 254 PRINTS Pathogenesis-related protein signature 133 149 IPR001938 -
Psa5g2885 254 PRINTS Pathogenesis-related protein signature 243 252 IPR001938 -
Psa5g2885 254 Pfam Thaumatin family 37 253 IPR001938 -
Psa5g2885 254 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 5 254 - -
Psa5g2885 254 PANTHER OS03G0233200 PROTEIN 5 254 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2885 Psa-Chr5 219403411 219404287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2885 10 253 Receptor kinase-like Gene Family AT5G38280 37.751 5.58e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2885 - - gmx:100809093 365.54