Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2882 ATGAGCTTGAATGGCTCAGTAGTAGCAGGACCTTCAGCTTCCAGTTCATCTTTCTTCGGAACAAGCTTGAAGAAGATTAATTCAAGGCTTCCAAACACTAAGGTTTCCTCTGGAAGTTTCAAAATTGTTGCTGCTGCAGAGATCGAGCCTGAAAAGCAGACAGACGGAGACAGATGGAGGGGTTTGGCCTATGATATTTCAGATGACCAACAAGACATCACAAGAGGAAAGGGTTTGGTTGATTCTGTTTTCCAGGCTCCACAAAATGCTGGAACTCATTATGCTATCATGAGTTCTTATGAATACCTTAGCACTGGACTTAAACAGTACAACTTTGACAACACTATGAGTGGTTTTTACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCATATCACTAAGAACTTCATGACCTTGCCAAACATCAAGGTTCCTCTCATTCTTGGTGTCTGGGGAGGCAAAGGACAGGGAAAATCTTTCCAAGCTGAGCTTGTTTTTGCCAAGATGGGAATCAACCCCATTATGATGAGTGCCGGAGAGCTTGAAAGTGGAAATGCAGGAGAGCCAGCAAAACTGATCAGACAGCGATACCGTGAAGCTGCTGACATAATCAAGAAGGGAAAGATGTGTGCTTTGTTCATCAATGATCTTGATGCAGGAGCAGGTCGTATGGGTGGAACCACCCAATACACTGTCAACAACCAGATGGTGAATGCCACACTCATGAACATTGCTGATAACCCCACAAATGTCCAACTCCCTGGTATGTACAACAAGGAAGAAAATGCTCGTGTTCCCATCATCGTCACAGGTAACGATTTCTCAACATTGTATGCTCCTCTCATCCGTGATGGACGTATGGAGAAATTCTACTGGGCTCCTACAAGAGAGGACCGTATTGGTGTCTGTACCGGAATATTCCGCCATGACAATATCGCAAATGAGGACATTGTCAAGCTTGTTGACACCTTCCCTGGCCAATCCATCGATTTCTTTGGTGCATTGAGGGCTAGAGTGTACGACGACGAAGTGAGGAAGTGGATTTCTGGGATAGGTGTTGAAGGAATTGGAAAGAGGCTTGTGAACTCAAAGGAAGGACCACCGGAATTCGACCAGCCAAAGATGACACTAGAAAAGCTGTTGGAATATGGTAACATGCTTGTCCAAGAACAAGAGAATGTGAAGAGAGTCCAATTGGCAGACAAGTATTTGAGTGAGGCTGCTCTTGGTGATGCTAATGAAGATGCTATCAAAAGGGGAACTTTCTAA 1272 0.4434 MSLNGSVVAGPSASSSSFFGTSLKKINSRLPNTKVSSGSFKIVAAAEIEPEKQTDGDRWRGLAYDISDDQQDITRGKGLVDSVFQAPQNAGTHYAIMSSYEYLSTGLKQYNFDNTMSGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGVWGGKGQGKSFQAELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRHDNIANEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGIGVEGIGKRLVNSKEGPPEFDQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANEDAIKRGTF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2882 423 Pfam ATPase family associated with various cellular activities (AAA) 151 292 IPR003959 GO:0005524|GO:0016887
Psa5g2882 423 Gene3D - 111 295 IPR027417 -
Psa5g2882 423 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 423 - -
Psa5g2882 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 320 IPR027417 -
Psa5g2882 423 PANTHER - 1 423 IPR044960 -
Psa5g2882 423 Gene3D - 296 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2882 Psa-Chr5 219324210 219328968 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2882 - - nnu:104591115 741.88