Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2880 ATGGCGAACTCTGAGAGCAGTAGCATACGCTCAAGATGGACTCTCAAGGGAACCACAGCTCTAGTTACCGGCGGAACTCGTGGAATCGGGCATGCTGTGGTGGAAGAACTAGCTGAGTTTGATGCCACATTATACACTTGTTCTAGAAACCAACAAGAGCTTAATAAATGCTTAAACAAGTGGAAAGAGAAAGGGTTTTCAATTCACGGATCGGTTTGTGATGCGACTTCTCCTCCTCAAAGAAAGGAGCTTGTTCGAAAAGTGGCTTCTGTCTTCACCGGCAACCTCAACATACTTGCAATGTGGGAACAAATGTGA 318 0.456 MANSESSSIRSRWTLKGTTALVTGGTRGIGHAVVEELAEFDATLYTCSRNQQELNKCLNKWKEKGFSIHGSVCDATSPPQRKELVRKVASVFTGNLNILAMWEQM* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2880 105 Gene3D - 2 101 - -
Psa5g2880 105 PANTHER TROPINONE REDUCTASE 5 99 IPR045000 GO:0016491
Psa5g2880 105 Pfam short chain dehydrogenase 19 99 IPR002347 -
Psa5g2880 105 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 5 99 - -
Psa5g2880 105 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 99 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2880 Psa-Chr5 219159525 219160528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2880 1 99 Miscellaneous Gene Families AT1G07440 56.566 4.72e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2880 K08081 - gmx:100819646 157.147