Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2862 ATGGAAGATCCATCGGAGAGGTTGGGATCGGGGGATTTGGATCCCGTCTCCGCCGTTAAGACCGACGACTTTTCCATGGAAATTGATCCGCCGTTTCAGGAAAACGCTGTAACTGCCGAGGACTGGCGGAAGTCTCTCAGCAAAGTCGTCCCTGCCGTCGTCGTCCTCCGAATAACCGCTACCCGCGCTTTCGACACTGAGTCCGCTTCCGCCAGTTACGCGACCGGTTTCGTCGTCGACAAGCGCCGTGGTATTATCCTCACCAATCGCCACGTCGTCAAGCCTGGACCTGTTGTTGCAGAAGCCATGTTCTTGAACCGCGAAGAGGTTCCGGTGCATCCTATATACAGAGATCCAGTACATGATTTTGGGTTCTATCGGTATGATCCTAGTGCTATACAATTTCTAACATATGAAGAGATACCTCTTGCTCCTGAGGGTGCTTGTGTTGGATTAGAAATCAGAGTTGTTGGTAATGATAGTGGTGAGAAGGTTTCCATATTGGCTGGTACTCTTGCTCGTTTGGACAGGGATGCTCCTCACTATAAGAAGGATGGGTATAATGACTTCAACACATTCTATATGCAAGCAGCATCTGGGACCAAAGGAGGATCAAGTGGTTCCCCAGTTATAGATTGGCAAGGCAGGGCAGTTGGCCTAAATGCTGGGAGCAAGACAACAAGTGCATCAGCATTCTTTTTACCTCTAGAACGAGTTGTGAGGGCATTAAAGTTTCTTCAAAAGGGGAGTGAAACATATGTTGATAAATGGATGGCAGTTTCTATACCTCGTGGTACACTTCAGGTGACTTTTCTTCATAAAGGGTTTGATGAGACTCGTCGACTTGGCCTTAGAAGTGAGACAGAGCAGACAGTACGACATGCTTCTCCTATCAGTGAAACTGGAATGCTTGTTGTGGAATCCGCGGTTCCAGGTGGTCCAGGCTATAAACATTTGGAACCGGGGGATGTACTTGTTCGTGTCAATGGTGAGGTCATTACTCAATTCCTGAAACTGGAGACTATACTTGATGACAGTGTAAACTCAAACATAGAATTACAAATTGAAAGAGGTGGTGTGTCAAAGAGTTTAACTCTAACGGTGCAAGATTTGCACTCAATAACTCCCGATTATTTCTTGCAAGTTAGTGGAGCAATAATCCACCCTCTTTCATATCAGCAGGCTAGGAACTTCCGATTTCACTGTGGTCTTGTTTATGTGACAGAACCAGGATATATGCTCTTTAAAGCAGGAGTTCCCCGCCATGCAATAATTAAGAAGTTTGCTGGTGAAGAAATATCTTGCCTTGAGGAACTAATATCAGTTCTGTCCAAGCTATCAAGGGGTGCTAGAGTACCATTGGAGTATATAAGCTACGTGGATCGTCACCGGCGGAAGTCGGTGTTGGTGACGGTTGATCGCCACGAGTGGTATGCACCTCCCCAGATATACACTCGGGACGACAGTACTGGCCTGTGGATTGCTAAGCCTGCTTTTCAGTCTGATTCCCCTTTTCTATCATCTGGGACTAAAGATGTTGGAAATCTGGCCAGCAATCCGATTTCATTGACTGGTGAGCATGCTTGTGGGGGAGATGTGTCTGAAGGTAACCATCAGGAGTTGGTTGATGGTGTCACTAGCATGGAGACTAATTATGAAGATCCTTTAGAGGATGTATCTCACCACAATGGATCTGATGGCATAGTAAAAAAACGGAGAGTAGATGATTTATCAACTGATGGAAGTGTAGCTGATATTTCCTTAAATGAATCCGAGGAAACTAAGCTAGAAAAATCAGGTGCCATACAGGATGATGGGTTAATGGACTATCAAGGTGCAACTGCTGCCACAGCAAATGCATCGATCACTGAACGTGTGATTGAGTCTACTCTTGTGATGTTTGAGGTGCATGTTCCTCCATCTTGTATGCTTGATGGTGTTCATTCGCAGCACTTTTTTGGAACCGGTGTCATAATATATCAAACTCAAGGTATGGGATTAGTTGCAGTTGACAAGAATACTGTTGCAGTATCTTCCTCTGATGTGTTGCTATCTTTTGCCGCTTTCCCCATTGAAATTCCTGGAGAGGTGGTATTTCTCCATCCTGTTCACAATTATGCTCTCATATCATATGACCCATCTGCCTTGGGACCTGTTGGTGCTTCAGTGGTTCGTGCTGCAGAGTTACTTCCAGAGCCAGCATTAAGCCGAGGAGATTCTGTTTACCTTGTGGGCTTAAGCAGAAGCCTTCAAGCAACTTCTAGGAAATCAGTTGTTACCAATCCTTGTGCTGCATTAAATATAGGATCTGCAGACTCCCCACGTTACAGGGCAACCAATATGGAAGTTATTGAGCTTGATACTGATTTTGGTAGTTCATTTTCGGGTGTGCTAACAGATGAACATGGAAGGGTCCAAGCTTTATGGGGAAGCTTCTCTACTCAGAAGAAGAAAAAGAGAAGAAAGATGAAAACTGGGAAAAGACGAGACAAGACAATATTTACTCATACTTCAAAAGACTACCAGATGCTGAAATTCAGTGGCAGTACATCAGAAGATCATCAATTCGTGAGGGGAATTCCGATTTATGCAATAAGCCAGGTCCTGGACAAGATCATATCTGCTGCAAATGGGCCACCTCTTCTCATAAATGGTGTCAAAAGGCCCATGCCACTTGTGAGAATATTAGAAGTTGAACTTTATCCAACATTACTTTCAAAGGCTCGCAGTTTTGGATTAAGTGATGTTTGGATTCAGGCACTTGTTAAGAAAGACCCGATAAGACGGCAGGTTTTACGCGTTAAAGGTTGTTTGGCTGGATCAAAGGCTGAGAATCTTTTGGAGCAAGGAGACATGATTTTAGCAATCAATAAAGAACCAGTCACATGCTTCCTTGATATTGAAAATGCTTGCCAAGCCTTAGATAAATCTAATACCAATGATGGCTTGCTCCAGATGACTATTTTTCGGCAGGGACGAGAGGTTGAACTTCTTGTGGGAACAGATGTTAGGGATGGAAATGGAACAACCCGTACAGTTAATTGGTGCGGTTGCGTAGTTCAAGATCCACATTCAGCGGTACGTGCTCTTGGATTTCTTCCTGAAGAGGGTCACGGTGTATATGTGGCAAGGTGGTGTCATGGGAGTCCGGTACATAGATATGGTTTGTATGCTCTTCAGTGGATAGTTGAAATTAATGGAAAACCAACTCCAGATCTAGATTCTTTTGTTAATGTGACAAAGGAACTAGAGCATGGAGAGTTTGTTCGTATAAGAACAATTCACCTCAACGGGAAGCCACGAGTCCTAACATTGAAGCAAGATTTGCACTACTGGCCTACATGGGAATTGAGGTTTAATCCAGACACTGCAGTCTGGCATCGTAATGTAATCAAGGCATTGAACTGCAGTTCAAGTTCTGTATGA 3426 0.4431 MEDPSERLGSGDLDPVSAVKTDDFSMEIDPPFQENAVTAEDWRKSLSKVVPAVVVLRITATRAFDTESASASYATGFVVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFYRYDPSAIQFLTYEEIPLAPEGACVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSSGSPVIDWQGRAVGLNAGSKTTSASAFFLPLERVVRALKFLQKGSETYVDKWMAVSIPRGTLQVTFLHKGFDETRRLGLRSETEQTVRHASPISETGMLVVESAVPGGPGYKHLEPGDVLVRVNGEVITQFLKLETILDDSVNSNIELQIERGGVSKSLTLTVQDLHSITPDYFLQVSGAIIHPLSYQQARNFRFHCGLVYVTEPGYMLFKAGVPRHAIIKKFAGEEISCLEELISVLSKLSRGARVPLEYISYVDRHRRKSVLVTVDRHEWYAPPQIYTRDDSTGLWIAKPAFQSDSPFLSSGTKDVGNLASNPISLTGEHACGGDVSEGNHQELVDGVTSMETNYEDPLEDVSHHNGSDGIVKKRRVDDLSTDGSVADISLNESEETKLEKSGAIQDDGLMDYQGATAATANASITERVIESTLVMFEVHVPPSCMLDGVHSQHFFGTGVIIYQTQGMGLVAVDKNTVAVSSSDVLLSFAAFPIEIPGEVVFLHPVHNYALISYDPSALGPVGASVVRAAELLPEPALSRGDSVYLVGLSRSLQATSRKSVVTNPCAALNIGSADSPRYRATNMEVIELDTDFGSSFSGVLTDEHGRVQALWGSFSTQKKKKRRKMKTGKRRDKTIFTHTSKDYQMLKFSGSTSEDHQFVRGIPIYAISQVLDKIISAANGPPLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDVWIQALVKKDPIRRQVLRVKGCLAGSKAENLLEQGDMILAINKEPVTCFLDIENACQALDKSNTNDGLLQMTIFRQGREVELLVGTDVRDGNGTTRTVNWCGCVVQDPHSAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTPDLDSFVNVTKELEHGEFVRIRTIHLNGKPRVLTLKQDLHYWPTWELRFNPDTAVWHRNVIKALNCSSSSV* 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2862 1141 Gene3D - 29 139 IPR043504 -
Psa5g2862 1141 Pfam PDZ domain 305 357 IPR041489 -
Psa5g2862 1141 Pfam Trypsin-like peptidase domain 74 220 - -
Psa5g2862 1141 Gene3D - 279 374 IPR036034 GO:0005515
Psa5g2862 1141 SUPERFAMILY Trypsin-like serine proteases 633 817 IPR009003 -
Psa5g2862 1141 Pfam PDZ-like domain 373 446 IPR025926 -
Psa5g2862 1141 Pfam PDZ-like domain 1009 1085 IPR025926 -
Psa5g2862 1141 Gene3D - 1011 1110 IPR036034 GO:0005515
Psa5g2862 1141 SUPERFAMILY PDZ domain-like 933 1035 IPR036034 GO:0005515
Psa5g2862 1141 ProSiteProfiles PDZ domain profile. 269 333 IPR001478 GO:0005515
Psa5g2862 1141 PRINTS HtrA/DegQ protease family signature 84 96 IPR001940 GO:0004252|GO:0006508
Psa5g2862 1141 PRINTS HtrA/DegQ protease family signature 150 174 IPR001940 GO:0004252|GO:0006508
Psa5g2862 1141 PRINTS HtrA/DegQ protease family signature 191 208 IPR001940 GO:0004252|GO:0006508
Psa5g2862 1141 PRINTS HtrA/DegQ protease family signature 213 230 IPR001940 GO:0004252|GO:0006508
Psa5g2862 1141 PRINTS HtrA/DegQ protease family signature 318 330 IPR001940 GO:0004252|GO:0006508
Psa5g2862 1141 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 21 818 - -
Psa5g2862 1141 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 843 1134 - -
Psa5g2862 1141 CDD PDZ_metalloprotease 305 368 - -
Psa5g2862 1141 SUPERFAMILY PDZ domain-like 1037 1115 IPR036034 GO:0005515
Psa5g2862 1141 Gene3D - 931 1005 IPR036034 GO:0005515
Psa5g2862 1141 SUPERFAMILY PDZ domain-like 304 403 IPR036034 GO:0005515
Psa5g2862 1141 PANTHER PROTEASE DO-LIKE 7 843 1134 - -
Psa5g2862 1141 PANTHER PROTEASE DO-LIKE 7 21 818 - -
Psa5g2862 1141 Gene3D - 146 260 IPR043504 -
Psa5g2862 1141 SMART pdz_new 280 359 IPR001478 GO:0005515
Psa5g2862 1141 SMART pdz_new 909 992 IPR001478 GO:0005515
Psa5g2862 1141 SMART pdz_new 1028 1097 IPR001478 GO:0005515
Psa5g2862 1141 SUPERFAMILY Trypsin-like serine proteases 40 245 IPR009003 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2862 K22686 - gmx:100809144 1982.22