Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2855 ATGGTAGCAATTGGTGTAGTAGTGGTGGGGAAGTCAAACTTCTTCATGATGGAAATCAATATTCCAAGGTGTCATCATCTAGAAGCACAAGGGATATTCTTTTCCAACATTTTGAGGACAAAAAGAAGGGAAAATTCTCATAAACTTCCGTGCAATGTAGTAGTGTCCCTGAATTTAAGATGGGACTTTCACATATTAGCCTCTTCCTGTCAAACATTTACAGCAGTGTATCCAAGAAGGCCATGTTTCTGTAGAACGCATTCTATGGCAACTAGTTTAGAGGAATCTGAATCATTACAAGGAGATAATCCTAACGAGGATATGGATCCATCTACAGACTCGGAAGACGAGAGATTGCCACAGCCACTTACCAGTGAACAGATAAAGGTATTGCTTGCTGATACTCAAAGAGCAAACCTCACTAAGAAGCTTAGTGAAGCCAACCAACAAAATCGGTTCCTAAAAAGACAGTTGTATATAAAGGAGGATGCATTGGTGAAATTTAAAAGTGAACTTGCTGTCATAGAGCTTGAAGTTCAGGCTTTGGGCAGGCTAGCAGAAGAGATAGCTAAATCTGGTATTCCAGAAGGTTCGAGGAAGATCAATGGAAAGTACATTCACACTCACCTTGTTGCTAGATTAAAAGCTGTACACGAACAATTAAACGAGCAAATAAAGGATGTTGATGCGGCACAATCGAAGGAGGTCTCTGTGTTTTGGGCCGGCATGGCTGAGAGTGTGCAAATTATGGGCAGCTTTGATGGCTGGAGCCAAGGAGAACACCTTTCACCAGAGTATACAGGTTCTTTTACAAGGTTCTCAACAACACTGATGCTCAGGCCTGGAAGGTATGAAGTCAAATTCCTAGTAGATGGTGAATGGCACCTATCAACAGAGTTACCTGTAACTGGTGAAGGGTTAACGAAAAATAATTTGTTAATTGTTGAGTGA 951 0.4111 MVAIGVVVVGKSNFFMMEINIPRCHHLEAQGIFFSNILRTKRRENSHKLPCNVVVSLNLRWDFHILASSCQTFTAVYPRRPCFCRTHSMATSLEESESLQGDNPNEDMDPSTDSEDERLPQPLTSEQIKVLLADTQRANLTKKLSEANQQNRFLKRQLYIKEDALVKFKSELAVIELEVQALGRLAEEIAKSGIPEGSRKINGKYIHTHLVARLKAVHEQLNEQIKDVDAAQSKEVSVFWAGMAESVQIMGSFDGWSQGEHLSPEYTGSFTRFSTTLMLRPGRYEVKFLVDGEWHLSTELPVTGEGLTKNNLLIVE* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2855 316 PANTHER PROTEIN PTST, CHLOROPLASTIC 27 316 - -
Psa5g2855 316 Coils Coil 211 234 - -
Psa5g2855 316 Gene3D Immunoglobulins 226 315 IPR013783 -
Psa5g2855 316 MobiDBLite consensus disorder prediction 94 119 - -
Psa5g2855 316 SUPERFAMILY E set domains 236 315 IPR014756 -
Psa5g2855 316 CDD E_set_AMPKbeta_like_N 238 315 - -
Psa5g2855 316 Coils Coil 137 157 - -
Psa5g2855 316 Pfam Glycogen recognition site of AMP-activated protein kinase 237 312 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2855 Psa-Chr5 217172577 217182769 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2855 - - gmx:100806282 446.817