Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2838 ATGATTCATTATTTTGCCTATACAGTCACAATGGCATCCTGTCCAATTCCTTCAAAGGAAGCAGAAAGTGAGAGTACAGCTATGCCGAATTGGGTTGAACTTCCAAGAGACATCACAGCAAACATTCTTCAGAGGCTTTGTACCATTGAAATTGTGACAAGTGTACGTTATGTGTGTCCTATATGGTGGCACATGTTCAAAGATCCTCTCATGTGGCGCAATATTCGAATGACCAATCTTAGTAATTTTCCATATTATTTTTCTGAGCAGATGGAGATTTGTTATTATGCCATTAAACAAAGTTGCGGTCATTTAGAATGCATTAGCATTGATTATTTTGCCACAGATGATCTCCTTAAATTCATATCTGACAATGCTAGTAATCTCAGAGGCCTGAGGCTTGTAAATTGCCATGGAATTTCTAATGAAGGGTTCTGTGAAGCTGTAAAAAAGCTGCCGGTGCTAGAGACAGTGAACATTTCACTATGTAACTTCTCGAAAGATTCTCTCGAGGTTGTTGGCCAATATTGCCCTCTTTTGACAGGTATCGCACTTGTGAGATCGTGGTTGGTGTATATGGTGTATGATATTCATGATGATGAAGCATTTGTTATTGCAAAAACTATGGTTGGGTTACGTTATCTTAATATTCAAGGAAATAAGATGTCTAATGCTGGGTTGCTTGCGATTCTTGCTGGTTGTCCTCATCTTGAGTTTCTTGATATTCGAAGATGCTATAATCTTCGGTTGGACGAAAGCTTGAAGAAAAAGTGCATTGATCAGATTAGAAATCTGCTACTCCCAGAGCAAACCGTTCATACTTTTGAAGACTATTGTGACGATGATCGTGTAACTTATAGTGATTCTATAATAGATGATGATTGTTTTGATCCTTACGATTGA 903 0.3798 MIHYFAYTVTMASCPIPSKEAESESTAMPNWVELPRDITANILQRLCTIEIVTSVRYVCPIWWHMFKDPLMWRNIRMTNLSNFPYYFSEQMEICYYAIKQSCGHLECISIDYFATDDLLKFISDNASNLRGLRLVNCHGISNEGFCEAVKKLPVLETVNISLCNFSKDSLEVVGQYCPLLTGIALVRSWLVYMVYDIHDDEAFVIAKTMVGLRYLNIQGNKMSNAGLLAILAGCPHLEFLDIRRCYNLRLDESLKKKCIDQIRNLLLPEQTVHTFEDYCDDDRVTYSDSIIDDDCFDPYD* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2838 300 Gene3D Ribonuclease Inhibitor 23 288 IPR032675 -
Psa5g2838 300 PANTHER F-BOX/LRR-REPEAT PROTEIN 21-RELATED 24 273 - -
Psa5g2838 300 Pfam Leucine Rich repeat 212 230 IPR001611 GO:0005515
Psa5g2838 300 ProSiteProfiles F-box domain profile. 28 75 IPR001810 GO:0005515
Psa5g2838 300 SUPERFAMILY RNI-like 59 249 - -
Psa5g2838 300 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 24 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2838 Psa-Chr5 215883732 215884963 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2838 - - mtr:MTR_5g027890 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2838 5 215883732 215884963 Psa5g2838 5 215883732 215884963 ECH