Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2825 ATGGTTGCTTTAGTTTCTCAAGAAAATGTCGTCACATTGGTTTCTCGTACCGGTCGAGAGTTGCAGCGTTATAGAAAAGGTCGCCGTCAAGTTGTTGGATGTATACCATATAGATTCAAGATTGGAGAGAAAAATTCATTGGATGTTTTGGATGAATTGGAAGTGCTTGTCATAAGTTCTCAAAAAGGAAAAGGGATGCTATTTCCAAAGGGAGGTTGGGAATTAGATGAATCTCAGAAGGAGGCAGCTATGAGAGAAACTATGGAGGAAGCTGGTGTAAAAGGCATTGTTGAGGGTAAATTAGGTAAATGGAGCTTCAAGAGTAAAACATATGACACTTTATATGATGGTTACATGTTCCCTTTACTTGTTCAAGAACAAATGGAGTTTTGGCCGGAACAAAACCTTCGTCAAAGAACATGGATGAGCATAAGTGAGGCAAGAGAGGTTTGTCAACACTGGTGGATGAAAGAGGCTTTGGACAGATTAGTAAACCGTCTTTTGAGTCAAAAAATTGTTCGTGAAAATCTTCGACCTATAAATTGCATTGGAGATGCCAAATCTGACTTGTTAATGGTGTAA 582 0.39 MVALVSQENVVTLVSRTGRELQRYRKGRRQVVGCIPYRFKIGEKNSLDVLDELEVLVISSQKGKGMLFPKGGWELDESQKEAAMRETMEEAGVKGIVEGKLGKWSFKSKTYDTLYDGYMFPLLVQEQMEFWPEQNLRQRTWMSISEAREVCQHWWMKEALDRLVNRLLSQKIVRENLRPINCIGDAKSDLLMV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2825 193 SUPERFAMILY Nudix 19 166 IPR015797 -
Psa5g2825 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 186 - -
Psa5g2825 193 Pfam NUDIX domain 51 161 IPR000086 -
Psa5g2825 193 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Psa5g2825 193 CDD Nudix_Hydrolase_9 30 157 - -
Psa5g2825 193 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 186 - -
Psa5g2825 193 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Psa5g2825 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2825 Psa-Chr5 214042818 214044601 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2825 K07766 - gmx:100795999 323.553