Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2822 ATGGAAACTCAGAAGAGTCAAGTGAAGCTAACAAGAACACAATCGTCACTTCTCAATCTCAGTTCTTCACCAACAATCCGATCATCGTTTCAAAGCCTTTCTTCCATCAACGATTACTGCGACGAAGAAGACGACAAGAACAACAAGAAGAAAATCAAGAAGCCACAAAAATCCTCTTATTACAACAATTCTTCACCGCGATCCGGGTCGACCCGAATAACCGCACCGGTTATCGCGGTTGTTTCGTTAGGTTTCCTCGGCGCGTGTTCTTTCTTCTTCTACTTCTCCTTCCTCGGGAGTGACGAGGTGCCGACCTCAGAGAATCTGTTACTCGCGTTAATTTTCATCGCCGTCGCGCTTTACTTCGCGTCGAGGAACAGAGGCTTAATCAACCATGGAGTTTCGGTTGTAAAGCAGTGGTACGACGGGAACGTGAAACGTTTCGGGTTAACGAAAACAGAAACGAAACCGGTTCAGTGGTTCATAGGTGGTTCAACAACAAAAGCTACAACAACGAAAAAGAAGAGTGTGAGGGAAGGAGTTGAGTTTTACAGCAATGGTGATTTTTACGAAGGGGAGTTTCATAAAGGAAGGAGTAATGGGAGTGGTGTTTACAATTACTTTGTGAATGGAAGATACGAAGGTGATTGGGTTGATGGAAGATACGATGGTTATGGAATTGAGAGTTGGGCTAGAGGGAGTCGCTATAAGGGTCAGTATAGGAAGGGAATGAGACATGGTTATGGAGTTTATAGATTCTACACCGGAGATTCTTTTTCCGGTGAATGGTGTAATGGTCAGAGTCATGGTATGGGTCTTCAGACTTGCTCTGATGCTAGCACTTATGTTGGTCAATTCAAACATGGTGTCAAACATGGTCTTGGTTGTTACCACTTTAGAAATGGAGATAGATATGCAGGAGAGTATTTTGGAGACAAAATTCATGGATTTGGAGTCTACCATTTTGCTAATGGACATTGTTATGAAGGAGCATGGCACGATGGTCGAAGGCAGGGTATTGGCTCATATACTTTTCGAACCGGTGATCGAAGATGTGGTGAATGGGATGCTGGCAACCTGAAGCATTCTCTTCCACCGCTAACTGATGTTGTCCATCGAGCGATTGAGGCTGCTAGGAAAACAGCTGCGGACGCGATAAACCTTAAGTCCGTCGATGATCAAGTTAACAATGCAGTGATCGCTGCCAACAAGGCCGCCACTGCTGCTAGAGTTGCTGCTGTGAAGGCTGTGCAGAACAGAATGGATGGAAAATTTTGTGAAACTTTTGTCTGA 1293 0.447 METQKSQVKLTRTQSSLLNLSSSPTIRSSFQSLSSINDYCDEEDDKNNKKKIKKPQKSSYYNNSSPRSGSTRITAPVIAVVSLGFLGACSFFFYFSFLGSDEVPTSENLLLALIFIAVALYFASRNRGLINHGVSVVKQWYDGNVKRFGLTKTETKPVQWFIGGSTTKATTTKKKSVREGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWARGSRYKGQYRKGMRHGYGVYRFYTGDSFSGEWCNGQSHGMGLQTCSDASTYVGQFKHGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHDGRRQGIGSYTFRTGDRRCGEWDAGNLKHSLPPLTDVVHRAIEAARKTAADAINLKSVDDQVNNAVIAANKAATAARVAAVKAVQNRMDGKFCETFV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2822 430 PANTHER HISTONE H3 K4-SPECIFIC METHYLTRANSFERASE SET7/9 FAMILY PROTEIN 21 423 - -
Psa5g2822 430 Pfam MORN repeat 282 304 IPR003409 -
Psa5g2822 430 Pfam MORN repeat 305 326 IPR003409 -
Psa5g2822 430 Pfam MORN repeat 328 350 IPR003409 -
Psa5g2822 430 Pfam MORN repeat 213 235 IPR003409 -
Psa5g2822 430 Pfam MORN repeat 190 207 IPR003409 -
Psa5g2822 430 Pfam MORN repeat 236 257 IPR003409 -
Psa5g2822 430 Pfam MORN repeat 259 278 IPR003409 -
Psa5g2822 430 MobiDBLite consensus disorder prediction 41 67 - -
Psa5g2822 430 Gene3D - 172 219 - -
Psa5g2822 430 Gene3D - 265 310 - -
Psa5g2822 430 Gene3D - 220 264 - -
Psa5g2822 430 Gene3D - 311 373 - -
Psa5g2822 430 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 184 278 - -
Psa5g2822 430 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 278 358 - -
Psa5g2822 430 SMART morn 303 324 IPR003409 -
Psa5g2822 430 SMART morn 234 255 IPR003409 -
Psa5g2822 430 SMART morn 188 210 IPR003409 -
Psa5g2822 430 SMART morn 326 347 IPR003409 -
Psa5g2822 430 SMART morn 280 301 IPR003409 -
Psa5g2822 430 SMART morn 211 232 IPR003409 -
Psa5g2822 430 SMART morn 257 278 IPR003409 -
Psa5g2822 430 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 21 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2822 Psa-Chr5 213528806 213531024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2822 164 364 Acyl Lipid Metabolism Gene Families AT1G21980 33.831 9.55e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2822 - - jre:108988356 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2822 5 213528806 213531024 Psa5g2822 5 213528806 213531024 ECH