Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2821 ATGCAGCTCTATAATATCCCTTGCTGCACGCACTCTCTCTTCAGATTCATACCCTCCTCCAAATTGTTACGCTTTTCTAATCATTTCAACACCCCCTATTTCTCCAAACCTCTCCTTTCCGCCGCCATGTCCACCGTTTCCACAGAAACTCAGCCTTTGCAGGTTGCAAAGCGGTTGGAGAAGTTCAAAACTACAATTTTCACCCAAATGAGTATGCTTGCCATCAAACATGGAGCCATAAACCTTGGTCAAGGTTTTCCCAATTTCGATGGTCCGGATTTCGTAAAGGAAGCAGCAATTCAGGCAATCAGAGATGGGAATAATCAGTATGCAAGGGGTTATGGAGTTCCAGACCTCAATATTGCCATTGCTGAGAGGTTCAAGAAAGATACTGGACTAGTGGTGGACCCTGAAAAGGAAATTACTGTTACGTCTGGGTGCACAGAAGCAATTGCTGCAACTATTTTAGGATTGATAAATTCGGGTGATGAGGTTATTGTGTTTGCTCCTTTTTATGATTCTTATGAAGCCACTTTATCCATGGCTGGTGCAAAAGTAAAAGGCATTACTTTGCGCCCTCCAGATTTTGCTCTCCCGATTGAAGAGTTGAAGTCCACCATCTCAAAGAATACTCGTGCCATTCTTTTAAATACCCCTCACAATCCTACCGGAAAGATGTTCACTCGAGAGGAGCTCAATACCATTGCATCTCTTTGCATCGAGAATGATGTTTTGGTGTTCAGTGATGAAGTTTATGACAAGTTGGCATTTGATTTGGAACACATTTCTATTGCTTCTTTGCCTGGAATGTTCGAGCGGACGGTGACAATGAACTCGTTAGGGAAGACATTCTCCTTGACCGGATGGAAAATCGGCTGGGCCATAGCACCTCCTCACTTAACATGGGGAGTGCGACAGGCACATGCTTACCTCACTTTTGCAACCTCAAATCCTATGCAGCGGGCTGCTGCAGTAGCTCTAAGAGCACCAGATTCTTATTACACTGAATTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTTGAAGGGTTGAAGGATGTTGGCTTCAAGATATTCCCGTCCAATGGAACATACTTTGTGGTTGTAGATCACACCCCTTTTGGACATGAAAACGATGTTGAATTTTGCGAATATCTTGTTAAGGAGGTGGGAGTGGTGGCAATTCCTACGAGTGTGTTTTACTTGAATCCAGAAGAGGGAAAAAATCTAGTCCGGTTTACTTTCTGCAAGGATGAAGGAACTCTTAGGGCTGCTGTAGAGAAGATGAAGGAGAAGCTTAGAAAATGA 1311 0.4355 MQLYNIPCCTHSLFRFIPSSKLLRFSNHFNTPYFSKPLLSAAMSTVSTETQPLQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGNNQYARGYGVPDLNIAIAERFKKDTGLVVDPEKEITVTSGCTEAIAATILGLINSGDEVIVFAPFYDSYEATLSMAGAKVKGITLRPPDFALPIEELKSTISKNTRAILLNTPHNPTGKMFTREELNTIASLCIENDVLVFSDEVYDKLAFDLEHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAYLTFATSNPMQRAAAVALRAPDSYYTELKRDYMAKRAILVEGLKDVGFKIFPSNGTYFVVVDHTPFGHENDVEFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEGTLRAAVEKMKEKLRK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2821 436 PANTHER FI04487P 55 436 - -
Psa5g2821 436 PANTHER FI04487P 55 436 - -
Psa5g2821 436 CDD AAT_like 80 432 - -
Psa5g2821 436 Pfam Aminotransferase class I and II 80 429 IPR004839 GO:0009058|GO:0030170
Psa5g2821 436 SUPERFAMILY PLP-dependent transferases 55 435 IPR015424 -
Psa5g2821 436 Gene3D Aspartate Aminotransferase, domain 1 69 430 IPR015422 GO:0003824
Psa5g2821 436 Gene3D - 92 330 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2821 Psa-Chr5 213235715 213239040 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2821 K23977 - gmx:100818968 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2821 5 213235715 213239040 Psa5g2821 5 213235715 213239040 ECH