Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2819 ATGTCCACTGCGAATCACACTCAAACCCATCCTTTGCAGGTTGCAAAGCGGTTAGAGAAGTTGAAAGCAACAATTTTCACCCAAATCAGTAAGCTTGCCATCAAACATGGAGCTGTTAATCTAGGTCAGGGTTTTCCCAATTTCGATGGTCCGGATTTTGTAAAGGAAGCAGCAATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCACAGGGTTATGGAGTTCCAGACCTCAGCATTGCCATTGCTGAGAGGTTTAAGAAAGATACTGGACTAGTAGTAGACCCTGAAAATCAAGTTACTGTTACAGCGGGTTGCACAGAAGCAATTGCTGCAACTGTATTAGGATTAATAAATCCTGGTGATGAGGTTATTCTGTTTGCTCCGTTTTATGATTCTTATATTGCCACTTTATCCATGGCTGGCGCGGATATAAAAAGCATAACGCTGCGCCCTCCAGATTTCGCTGTCCCGATTGATGAGTTGAAGTCGACAATCTCAAAGAACACTCGTGCAATTCTTTTAAATACCCCTCACAATCCTACAGGGAAGATGTTCACTAGAGAGGAGCTCAATACCATTGCATCTCTATGCATTGAGAATGATGTCTTGGTTTTCACCGATGAAGTTTATCATAAGTTGACATTTGATATGGAACACATTTCAATTGCTTCTTTGCCCGAAATGTTTGAGCGGACTGTGACGATGAACTCGTTAGGGAAGACATTCTCCTTGACAGGATGGAAGGTTGGATGGGCCATAGCACCGGAACACTTATCATGGGGAATGCGACAAGCTCACACGTTCCTCAATTTCACAATTGCAACTCCTTTGCAGTGTGGTGCAGTGGCAGCTCTTCGAGCACCAGACTCTTACTATGCGGATCTAAAGAGGGATTATATAGCAAAGAAAACTATTTTGGTGGAAGGTTTGAAGAGTGTTGGATTCAAGGTTTTCCCATCCAGTGGAACCTTCTTTGTGCTTGCAGATCACACCCCTTTTGGATTTGAAAATGATGTTGCATTTTGTGAATATCTAATTAAGGAGATTGGGGTGGCGGCAATACCTTGCAGTGTGTTTTACTTGAATCAAGAAGAGGGGAAGAATTTAGTCAGATTCACTTTCTGCAAGGACGAGGAAACTCTTAAGGCCGCCATCGCGAGGATGAAGGAGAGGCTTAGAAAATAA 1188 0.4301 MSTANHTQTHPLQVAKRLEKLKATIFTQISKLAIKHGAVNLGQGFPNFDGPDFVKEAAIQAIRDGKNQYAQGYGVPDLSIAIAERFKKDTGLVVDPENQVTVTAGCTEAIAATVLGLINPGDEVILFAPFYDSYIATLSMAGADIKSITLRPPDFAVPIDELKSTISKNTRAILLNTPHNPTGKMFTREELNTIASLCIENDVLVFTDEVYHKLTFDMEHISIASLPEMFERTVTMNSLGKTFSLTGWKVGWAIAPEHLSWGMRQAHTFLNFTIATPLQCGAVAALRAPDSYYADLKRDYIAKKTILVEGLKSVGFKVFPSSGTFFVLADHTPFGFENDVAFCEYLIKEIGVAAIPCSVFYLNQEEGKNLVRFTFCKDEETLKAAIARMKERLRK* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2819 395 Gene3D - 51 289 IPR015421 GO:0003824
Psa5g2819 395 Pfam Aminotransferase class I and II 39 388 IPR004839 GO:0009058|GO:0030170
Psa5g2819 395 PANTHER FI04487P 14 394 - -
Psa5g2819 395 SUPERFAMILY PLP-dependent transferases 14 394 IPR015424 -
Psa5g2819 395 CDD AAT_like 39 391 - -
Psa5g2819 395 Gene3D Aspartate Aminotransferase, domain 1 28 389 IPR015422 GO:0003824
Psa5g2819 395 PANTHER FI04487P 14 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2819 Psa-Chr5 213180908 213183347 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2819 K23977 - gmx:100818968 678.322