Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2817 ATGGCGGACAACAACTCCGATCAAGAGAAGCGATTATCGCAAAAAATTGCCGCAATTCTCGACGAAGTTCGAACCTCATACGCCACGCACAACCGTAAACTCAAGGAACTATCTCTCCTCCGGTCCAAATCCACTTCACCGTCTCACTTCTTCTCCGCATTTTCCAAAGCCCTAATTTCTCTCTTCAAATTTCAAAGACGAATTGCCTCTGCTGACCGTGTTGTTTCCTTCGTCGCCTCTTTCACTGCTGCTCGTAATCCTTCGGATGCTGCAGATTGCGATGAGTTTCTCGACCATTTCCTTCATTTCCTCCTTGTTGCTATGGCGGCGGCAGATAAGACTGTTAGATTCAGAGCCTGCCATATTGCCTCCGAGATAATATTGCGGTTGCCAGATGACGCAGAAGTGAGCAATGACCTATGGGATGAGGTAATAGAGGGCATGAAGGTTAGGGTACGAGACAAGATCCATTTGGTGCGTACTTTTGCAGTTAGGGCACTTTCACGTTTCGTCAATGACTCTTCCAACATTGACATTCTTGATTTATTCCTTGAGATGCTTCCTTTGGAGCAAAATGCGGATGTTCGTAAGATGATTGTGTTGTCTTTGCCTGCTTCCGGTGCAACCTCTCAAGTTATCATTGATTGTACCTTGGATGTGAGTGAATCTGTTCGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAAGTTTAAGCATTAAGCACAGGACGATAATTCTTCGGAGAGGACTTGCTGACCGATCTGTTGGTGTCTCGAAGGAATGTTTCAAACTATTGAAAGACGAGTGGCTTATAAAATGCTGTAATGGTGATCCTTTACAACTTTTGAAGTATCTCGATGTTGAAACTTATGAATCAGTGAGCGAGTCTGTCATGGAGGCACTTCTAAAAGCTGGCTTAGTAAAACTAAAGAATGGTGCAAGTATCCAGCAGTATATATCATCAAATGGTGACACAGCAGAGGGGGAAGCAGTTCATTGTCCTCCAAGCATTGTATTGATGGAAGCAGAGGCTGCTCTTTATTGGAGAATTGTTTGCAAGCATTTGCAGTCAGAAGCACATACCTTAGGCTCTGATGCTGCAGCCACAGCGGGTACCGAAGCAGAAGTATATGCTGCAGAAGCATCAGATAAAAATGATCTTCTAGAAAAAATTCTTCCTGCTACAGTTGATGATTACATAGAGTTGGTCAGAGCTAATATCAATGCTGGATCGAACCATCGATTTACATGCCGGCAGCTGCTTTTGCTTGGTGCTATGTTTGACTTTTCTGACACTTCATATAGAAAAGCTGCTAGTGCATTTCTGCAGGAACTGATGAGCAAGCCTCCTGAGCATGAGGTTGATAATGAAGGGAATATTGTTGTCATTGGGGATGGCTTAAGTTTTGGTGGAGATACTCACTGGGCAGAGGCCATAGCCAAATTATCAAGGAAAGTCCATGCTGCTCCTGGTGAATTTGAAGAAGTTGTTGTTGCAATCGTAGAAAAGCTAGCTCAACCTTGCAGAGAGAGAGCAGCAGATTGCGTGCAGTGGATACACACCCTTTCCCTTATTGGCCTTTTATTGAAAAATGCTGTGTCCATGCGCTTTCTTCAGGGCAAGGCTATAGAACCAGATGAACTACTCCAATCTTTACTTCTTCCCGGGGCAAAACAATCTCACTTGGACGTGCAAAGGATTGCTGTAAGATGTCTTGGCCTCTATGGGCTTTTGGAGAGGAAACCAAATGTTGAACTTGTGAAACAGCTAAGAGTTTCATACATTAAGGGGCCACATATAATTAGTATAGAGGCTGCTAAAGCATTAATTGATCTTGTGATGTGGCATGGTCCTCAAGAAATTGACAGTGTTTTAAATCACGAAATTCCAAGCCAGTTAAACTGTGACAAAAAGTGTTTTTGTCCTGTGAACTTCTCTGATTTCGAAGGGGATTCAAATTCAAACGTTGACATACTTGATCTTTTATACGGTGGCTTTGAAAATGAAGACTGGGCTAATCCTTTAACTAGCAATGAAGATGAATGCATTTATGCTATACTTGGGGAGGGCTTTGCGAAAATTCTTCTCCTAAGTGACAACTATCCAAGCATACCAGCTTCTTTGCACCCTGTGCTTTTATCTAAACTCATTTACTTGTACTTCAGTGACGTATCAGAAAATCTGCACAGGTTGAAGCAATGCCTATCTGTTTTCTTTGAGCACTACTCGTGTCTCTCAACAAAACACAAGAGGTGTATATTGAAGGCTTTCGTTCCAGTTATGCGTTCAATGTGGCCAGGAGTTTTTGGCAATTCCGGGGGTTCTCCTATTATGGTGTCTCAGTTACGTAAGCGTGCAGTTCAAGCTTCACGTTTTATGTTGCAGATGGTGCAGATTCCATTATTTGTTAAAGAGACTGAAGCAGTGTGTGAAAACTCTAGTACAGAAACCCCACAAGTTATAGATAGTTGTGCTGAAGTTCCATTTGAGTGTGGTGAGGAGGGGCTCGCACTACACATAGCCATAGAGGTCGCAAGCTTTCACTCAAAGAAGACAGCTGCTGAGAAGGCATACGTATCGGCATTATGTAGAATACTTGTCTCGCTTCATTTTCGGTTATCAGAACAAGGGCCCATTAAAGTTATGAGGAAGCTTTTAAATCGTCTGACTGAATGTGTATCTTCAGAGAAGGATATTGTTAAAGAATTAAAGCGCATGGCTGATCATCTAATGACAGTTGACAGGCAACAAGATCAGGAGTTGTTGCAGGATGACGTTAATCTCATTTTCGGGAAACTAGAACTTGAGTTCAACCTGGATTTGGATGCTTCTGTTGCAATGCCACAAACACCAGCTGTACAGCCAACGAGAGCCACACGGACAAGGAGAAGGGTAAGGATTGAGAAAGATAGTTCTGATTCTGAGGACGATGAAGAAGTTTTACCTGCTTCTGTGGTTCCTACCACCATTAATACCGTAATAGGTCGCTCACAGAGAGCAAGCAAAACTGCAGCCATGAACAAGATGTCGTCTACATGTAGAACACTTGAAATTGATGAAATCGACGAGCTAGAGGAAGAAGAGTCGAATGTGACATCTGAAGATTCTGAAGAATCCGACCAGAATAGTTAA 3144 0.4275 MADNNSDQEKRLSQKIAAILDEVRTSYATHNRKLKELSLLRSKSTSPSHFFSAFSKALISLFKFQRRIASADRVVSFVASFTAARNPSDAADCDEFLDHFLHFLLVAMAAADKTVRFRACHIASEIILRLPDDAEVSNDLWDEVIEGMKVRVRDKIHLVRTFAVRALSRFVNDSSNIDILDLFLEMLPLEQNADVRKMIVLSLPASGATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKHRTIILRRGLADRSVGVSKECFKLLKDEWLIKCCNGDPLQLLKYLDVETYESVSESVMEALLKAGLVKLKNGASIQQYISSNGDTAEGEAVHCPPSIVLMEAEAALYWRIVCKHLQSEAHTLGSDAAATAGTEAEVYAAEASDKNDLLEKILPATVDDYIELVRANINAGSNHRFTCRQLLLLGAMFDFSDTSYRKAASAFLQELMSKPPEHEVDNEGNIVVIGDGLSFGGDTHWAEAIAKLSRKVHAAPGEFEEVVVAIVEKLAQPCRERAADCVQWIHTLSLIGLLLKNAVSMRFLQGKAIEPDELLQSLLLPGAKQSHLDVQRIAVRCLGLYGLLERKPNVELVKQLRVSYIKGPHIISIEAAKALIDLVMWHGPQEIDSVLNHEIPSQLNCDKKCFCPVNFSDFEGDSNSNVDILDLLYGGFENEDWANPLTSNEDECIYAILGEGFAKILLLSDNYPSIPASLHPVLLSKLIYLYFSDVSENLHRLKQCLSVFFEHYSCLSTKHKRCILKAFVPVMRSMWPGVFGNSGGSPIMVSQLRKRAVQASRFMLQMVQIPLFVKETEAVCENSSTETPQVIDSCAEVPFECGEEGLALHIAIEVASFHSKKTAAEKAYVSALCRILVSLHFRLSEQGPIKVMRKLLNRLTECVSSEKDIVKELKRMADHLMTVDRQQDQELLQDDVNLIFGKLELEFNLDLDASVAMPQTPAVQPTRATRTRRRVRIEKDSSDSEDDEEVLPASVVPTTINTVIGRSQRASKTAAMNKMSSTCRTLEIDEIDELEEEESNVTSEDSEESDQNS* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2817 1047 MobiDBLite consensus disorder prediction 1002 1047 - -
Psa5g2817 1047 Gene3D - 54 242 IPR011989 -
Psa5g2817 1047 MobiDBLite consensus disorder prediction 1002 1018 - -
Psa5g2817 1047 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 7 1030 IPR027165 GO:0000796|GO:0007076
Psa5g2817 1047 MobiDBLite consensus disorder prediction 954 986 - -
Psa5g2817 1047 Pfam Nuclear condensing complex subunits, C-term domain 526 875 IPR025977 -
Psa5g2817 1047 PANTHER CONDENSIN COMPLEX SUBUNIT 3 7 1030 - -
Psa5g2817 1047 SUPERFAMILY ARM repeat 85 762 IPR016024 -
Psa5g2817 1047 MobiDBLite consensus disorder prediction 1023 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2817 Psa-Chr5 212940964 212950638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2817 K06678 - gmx:100817677 1560.04