LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g2760	ATGGCTAGTAGTAATCTTCGTCAGTTACAAGCTGCTCCTAACAAAATGCAGCTTAAGAAGGAGAGACGCATGTTCTCTACTTCTGATGATAGTGCCATGATGAAACAAGTTCAGTCCACTCATGCACCCGATGGCCGCGAAATCGATGTTAAACCTCTTATTCAAATTGTTGATGAAATCTTGATTCAAATCATTGCTCGAAGCGTCGAGGGTCATGAACATGTGAAAAAAGAGCAAGAGACATTGGAAACTGCTGTTGCTTTGGCTGAATTTGATATGCTTGATGCACTTGCTTTTATTATTAACAAAATTTCTTGCGAGCTATCATGCAAATGCTCAGGAGGTGGAGATGCACATGCATCAACAATGGTGTTACTGAATTACCTATCAAGCTATTCTTGGCATGCAAAAGTTGTGTTAGCCTTAGCAGCATTCGCTGTTATTTTCGGAGAGTTTTGGCTTGTTGCTCAATCAAGTGCTTCAAACACACTTGCCAAATCTGTGGCTCTCCTTAAACAACTTCCTGACATTGTAGAGAATTCCGTTTCGTTGAGACCGCAATTTGATGCACTCAATAAGCTTGTGAAGGCTGCACTTGATGTCACAATGTCCATTGTTGAATTCAAGGAGTTACCATCTGAGTATATTTCAGAAGATGTTCCTCCTATGTCTGTTGCAAGTGCTCATATTCCTATTGCTACCTATTGGGTCATTAGAAGCATTGTGGCATGTGCTTCACAAATTGCAAGTCTCATTGGGATGAGAAATGAGGCCTTGTCATCAGCTTCAGAGGCATGGGAATTATCGAGTTTGGCTCACAAAGTCGCTAGTATATACGAGCACCTCAAAAACCAACTTGCTCTTTGCTATCAATATATAGATGAAAAGAGGCATATTGAGGCATTTCACAATCTGATACGTCTTTTCGAGACAGTTCATGTAGACAACATGAAAATCATGAGAGCACTGATTTATGCAAAGGATGATATCCCTCCACTTATAGACGGAACTTCAAAATTAAGGGTTAGTCTTGAGGTACTAAGGAGGAAACATGTGCTACTTCTCATATCAGATCTTGATATTTCGCAAGAAGAGATTATGATACTCGATAATTTGTACAAAGATGCAAGATCAAGAGGTGAGACATACTATGAGATGGTGTGGATTCCGGTTGTGGACAAAGCGACATGGAATGAAGTGAATAAGCAAAAGTTTGAGTATCTTCAATCATCAATGCCATGGTTCAGTGTTCGCGATCCTTTTATCATTGAACCGTCGGTGATTAAGTATATCAAAGAAGTGTGGAATTTCACAAAGAGAGCTATTCTAGTAGCTCTTGATCCACAAGGTAGATTGTCCTCCCAAAATGCTCTTCATATGATATGGATTTGGGGAAATTTGGCCTTCCCTTTCACTAGTGAGAAAGAAGAGTCCTTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTTCTTGTTGATGGCATTGATCCCGCGGTTTTAGACTGGATGACAGAAGGAAAAATTGTATGTCTATATGGAGGAGAAGATCTCGAGTGGATAGAAACATTCACGAAAACAGCGATGAACCTAGCAAGAACAAGCAACTTCGGTTTAGAGATGGTTTATGTAGGAAAAAGCAATGCAAAAGAGAGAATGCAGAGAATGATAGCCACCTTCAACACAAAAAGATTCAGTTACTTTTTCCCGAACGTGACGTCTATTTGGTTCTTTTGGGCAAGACTCGAGAGCATGTTATACTCGAAACTTCAACATGGAAGGACAGTCGAGAACGACAAGATAATGAGCGAAGTTATGACAGTACTTAGCTTCGATGGAAGTGATCGAGGGTGGGCGATATTCTGCAGAGGACCATCTGAAATGGCAAGAGCGAAAGGTGATACTGCTTTAACAAGTTTGAGAGATTATGATAAGTGGAAACACAATATTGAACAAGATGGTTGGGTTCCTGCATTGAATGATTATATTAAGGAAATTCAACAGCCGCATCATTGTAATCGGCTTATTCTTCCCGGGAGCACGGGTGGAATACCGCAGAAAGTTGTTTGCGCTGAATGCGGTCGTCAAATGGAGAAATATTTCATGTATCGTTGTTGTGTGGAGTGA	2121	0.4064	MASSNLRQLQAAPNKMQLKKERRMFSTSDDSAMMKQVQSTHAPDGREIDVKPLIQIVDEILIQIIARSVEGHEHVKKEQETLETAVALAEFDMLDALAFIINKISCELSCKCSGGGDAHASTMVLLNYLSSYSWHAKVVLALAAFAVIFGEFWLVAQSSASNTLAKSVALLKQLPDIVENSVSLRPQFDALNKLVKAALDVTMSIVEFKELPSEYISEDVPPMSVASAHIPIATYWVIRSIVACASQIASLIGMRNEALSSASEAWELSSLAHKVASIYEHLKNQLALCYQYIDEKRHIEAFHNLIRLFETVHVDNMKIMRALIYAKDDIPPLIDGTSKLRVSLEVLRRKHVLLLISDLDISQEEIMILDNLYKDARSRGETYYEMVWIPVVDKATWNEVNKQKFEYLQSSMPWFSVRDPFIIEPSVIKYIKEVWNFTKRAILVALDPQGRLSSQNALHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPAVLDWMTEGKIVCLYGGEDLEWIETFTKTAMNLARTSNFGLEMVYVGKSNAKERMQRMIATFNTKRFSYFFPNVTSIWFFWARLESMLYSKLQHGRTVENDKIMSEVMTVLSFDGSDRGWAIFCRGPSEMARAKGDTALTSLRDYDKWKHNIEQDGWVPALNDYIKEIQQPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE*	707

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g2760	706	PANTHER	PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE	12	705	IPR039299	GO:0010088
	Psa5g2760	706	PANTHER	PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE	12	705	-	-
	Psa5g2760	706	Pfam	Sieve element occlusion C-terminus	475	704	IPR027944	-
	Psa5g2760	706	Pfam	Sieve element occlusion N-terminus	28	313	IPR027942	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa5g2760	Psa-Chr5	209457238	209460487	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g2760	-		-	gmx:100811452	1177.93

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa5g2760	5	209457238	209460487	Psa5g2760	5	209457238	209460487	ECH