Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2728 ATGGTGCCCGGGGTTGCCACTGCACAGCCTCTTTTTTCATTTGGATTGATTTCTGACGTCCAATATGCCGACATTCCTGATGGTCGCTCATTCCTTGGTGTTCCACGGTATTATAAGCATAGTATTCTTATTTTGCAGAGAGCAGTTAAAGAATGGAATGCTCATCAGAAGCATAAGTTTGTGATTAATTTTGGCGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTATTGATGCTGTAAAGAAAGTTGTGGATGAATTTGAAATGTTCAGGGGACCTGTGTATCATATGATTGGAAATCACTGTCTGTACAATCTTCCTCGAAGCAAGTTACTTCCATTATTGAAGATCCAAACCCTTGATGGTTGTGCTTACTATGATTTCTCACCAGTTCCGGAATATAGATTTGTAGTTCTGGATAGCTATGACATCAGTGCCATTGGGTGGTCTCGAGATCATCCAAAAACATTGGAGGCCTTGAAATTGCTAAGAGAGAAGAATCCAAATGAAGATAAGAACAGTCCAACAAACTTGAAGGGGCTTGAAAGAAGGTTTCTTATGTTTAATGGAGGCATTGGAAAGGAACAAATGGATTGGCTAGATGGTGTTCTCCAGAATGCAACCAAATTGAAACAGAAGGTGGTTGTCTCTTCCCATCTGCCTCTAGATCCTTGTGCTACATCCGAGGAGGCGCTGTTGTGGAATTGTGATGAAGTGATGAATTTGATACACAGATACAAATGTGTTAAGGTCATTCTTGCTGGACATGATCATAAAGGTGGGTACTCCATTGATTCTCATGGGGTACACCATAGAGTTTTTGAAGCCGCGCTTGAATGTCCTCCTGGCACAGATGCATTTGGAAGCGTTTATGTCTATGATGACAGGATATCACTGGTAGGAACTGACAGAATGGCGAGTACAGACATGCATTTTAGTCCTCAATAA 951 0.4122 MVPGVATAQPLFSFGLISDVQYADIPDGRSFLGVPRYYKHSILILQRAVKEWNAHQKHKFVINFGDIVDGFCPKDQSIDAVKKVVDEFEMFRGPVYHMIGNHCLYNLPRSKLLPLLKIQTLDGCAYYDFSPVPEYRFVVLDSYDISAIGWSRDHPKTLEALKLLREKNPNEDKNSPTNLKGLERRFLMFNGGIGKEQMDWLDGVLQNATKLKQKVVVSSHLPLDPCATSEEALLWNCDEVMNLIHRYKCVKVILAGHDHKGGYSIDSHGVHHRVFEAALECPPGTDAFGSVYVYDDRISLVGTDRMASTDMHFSPQ* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2728 316 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 3 316 - -
Psa5g2728 316 SUPERFAMILY Metallo-dependent phosphatases 10 309 IPR029052 -
Psa5g2728 316 Pfam Calcineurin-like phosphoesterase 13 260 IPR004843 GO:0016787
Psa5g2728 316 CDD MPP_Nbla03831 12 300 IPR041869 -
Psa5g2728 316 PANTHER - 3 316 - -
Psa5g2728 316 Gene3D - 7 306 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2728 Psa-Chr5 207676827 207679744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2728 K01517 - gmx:100792911 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2728 5 207676827 207679744 Psa5g2728 5 207676827 207679744 ECH
Psa5g2728 5 207676827 207679744 Psa4g1441 4 101151607 101153936 PCT