Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2683 ATGACAGTTCTTATAAAACACCACTTTGCTTCGATATTTTCAATTTCTATGGCTTTGCATTGCAGTAAGAAACCAGGAGCAGAGAGGGGAACTCTTGTGCTTCAGAGTTCTATTCTTGATTTTGGTCAGATATCTGAGAATGAACGGGACAAACTCATAAAGAGACATATGGTTTCTATTGTCAGCTGTATTTTATCTCTGTGCTCTTGTTCTTCCGACCCTGTAGTCCCTTTCTTTTCCAAGGATATAGTGTCACTTGAAATTCAAACAATTGTTGATGGATTTCTGGACTTGGATGGAAGTCACACAACCGCTGCTGTTGCTGACAAGATCAACATTTTTCGCCCTGATAGAGTTTTTATGTTTTTGGTAGAAACTCATTATAAAATTACAGCAGCGTCTCATTTCAGGCATAAGTGCCACCGATTGTCTGGAATTGAAGTGCTTATTAGTGTTCTTGGTCAAAGAGTTACCGCTTTAAGCACATCCAATTATCTTTTCAACTTGATTGGACCGTTGATTGAATGTCCTGCTTTACAAGACCAATGCTGTCGTATACTTTCTGCATTGTTGCTATCTTTTAAGAAGCATTTAACAGCAGATATCACTCGTATGCTCGGGGAACAGCTCCAGTTCCTTGTTTCAAAGTTAGTGGTGTGTTGCGTTCCTGCCGAAAGGAAAGAATCACATGATAGCTCTGTATCAAGAGCTTTATCTCTGCTCCATATGCTTACTTTGGATTCTGATCCAACTTTGCATGATTATGTCAAAGAATTGGAGCCATTCCCCGAATTAAAAATATTTGACGAGACACGGAATTTTCACGAAGAATTATGCCAAACTTACTCTATTCGTGACCACATATTAAAGTTTGTAAAGAGGTCTTGCTACCTTCCACCAAGGTTACTTTTGTCAAGTCTCCAGGCATTGCATAAGAAGTTACTGGTTGAAGAAACCTTTCAAAGAAGAGGGAGATCTGAAGGTCACTTTAAGGACAAGTATTGGCATGGTGACCATGAAATTGTGCATGCAGTTTGGACACTTGTTCACATGTGTGGCTCGGATGATGCAAATGGTGTCAGAGAATTGGTTTCAGATTTCATTTCTAGGGTTGGTGCTGGAGACCCACACTCTGTTGTTTTCCATCTTCCAGGCAAGAGTACTCATATACATCCAAGCAAATCAATTGATAACTGCAGTGTAGGGGAAACCAGTTACAACATAGATGTGTGCATATCTGAAGAACTTCTAGTTGTCCTTATGAAATTATTAATGAAGTATCTGATGGATGATTCAGTGAAAATTGTTGATATGGCCTCACAAACTCTACGTGGAATTCTTTCGACTGAAAGAGGCCAAAAAGCTTTACAGTCATTTGATTCTTACCAAAAGTCTCTCGTCGAGATACACTCCAAAGGTGTTAATATTGAACTTGTGGAAAATTTCCTTTTGGATTTGGATAGGAAGTCAAAAGTTGAAAAAATTTCATTGGAGAAGTCTACTGTTTGGTTGACAGATGGTAAATCTTTTGAGACGTGGGTTTGCCCTTTGGTGTATTCACTTATTGTCTACTGTAATGACGTGGTACTAAGATTATGCCAAGATATGGTACTGTTGAAAGCTGAAGCTGCCGAGCTTCTTTTGCCAAGTATATTTGTCAACATTGCTGCGAGGAAGGATATGGAGATTGATCTTCACAAATTAATTTCTTTGCAGTTGAAGGAGCATATATTTGTTAAGTCAAATAAGATGATCAAATCAATTCAAGTGATTTTGAATTGCCTTAATGAACTTCGTGTTTGTTATGTCATGGAAAGATCTTCACTTGTGCCATCAAGGCATGATGTGTCCAAGAATTCAAGAGCCCCAAATAATAGCTCAAAATCTCGGTCCACTCCTGCAAAGACGAGACAGAGACAATCTGCTGTTGTTTCTAGTGGCTTGGCAGAATCAACGTCTTCGTGGGAGAAAGTTTATTGGCTTTCAGTTGATTATCTACTTGTTGCCAAGGCAGCAGTTAGTTGTGGATCATATTTTACATCAGTGATGTATGTGGAACATTGGTGCGAAGAGGAATTCAAAGCTTTGACTGTTGGAGGTCCAGATTTCTCTCACAACGAAATGCTGCCTGCTCATATTGAAATACTCGTTTCAGCCGTCACTAGAATCAACGAACCTGATAGCTTATATGGAATTCTTCAGTGCCACAAGTTGACTTCTCAAGTTATCACATTTGAGCACGAGGGAAATTGGGGAAAGGCTCTTGAGTATTATGATTTGCAAGTTCAATCAGGTGTCTTATTACCAAAGGACAGCAGCTCAAGAAGTTTATCACTGGAACAAGCTGGAACAGCAAAATCTTCATATTTTGCCTCAGAGATTGAGATGAAGCAGGGAAGAGCTTACAAAGGATTGATTAGATCATTGCAACAAATTGGTTGCACACATGTGCTTGACATGTATTGTCAAGGGTTGACATCAAGCAAAGAAGAGCTTCAGTATGACAAGGAATTTGCTGAATTGCAGTATGAGTCAGCCTGGCGTGCTGGGAACTGGGATTTCTCTTTACCATGTGTAGGAACTAGTTTTCCTCCAACTCAAAATATTAAACGCGACCAATTCAATGAAAATTTGCACAGTTGTTTAAGGGCACTCCAGGAAGGTGATTTAAGTGATTTCCAGAGAAAACTGAGAGATTCAAAGCAGGAGCTTGTGTGGTCTGTTTCTCATGCAAGTGAAGAGAGCACTGAGTACATTTACTTGACTATCATCAGACTCCAGATGCTTTATCATCTTGGCATGGCTTGGGATTTGCGCTGGAGAATTTGTCAAGATGATAGTAGAAAGTTTTCTGTTCAGAAGCGAAATGTGTCTCTTGAGCTTGTGATTCCTTCAATTGAACAGCTATCATGGCTGGATATGGATTGGTGCTCAATTTTGCAACGGACGCAGCTGCATATGAATTTGCTAGAACCATTTATACCATTTCGACGAGTTCTACTTCAAACTTTGAGTTGTAGAGATAATATGTTGCAACATCTTCTACAGTCTGCTACCACACTTCGGAAGGGATCTAGGTTTTCTCAAGCAGCTGGTGCTTTGCATGAGTTTAAGTCTCTTTGTGTTGGAACCAAAGAGCAGCACTCATCTTCATATTGGCTTGGAAGGATTGAAGAAGCAAAGCTTTTTCGCGCTCAAGGTCAAAATGAGATGGCTATCAACCTTGGAATGTACATATCCCAAAATTATCAAAGTAATGAAGAGGCTTCAGATGTATATCGGTTGATTGGGAAGTGGCTGGCAGAGACTAGATCTAGCAACTCGAGAACAATTTTGGAGAAGTATTTGAAACCTGCAGTCTCTATTACTGAGGATGTGAAAACTGCGGATAAAAAGGCCATGGGACGGAGATGTCAAACTCATTTTCATCTTGCACATTATACTGATGCTCTATTTAGGAGCCATGAAGAAAGACTTAACTCTAATGAGTGGCAATCAGCAATGCGCTTAAGAAAGCATAAGACAGTAGAATTGGAAGCACTCATTAAAAGGTTAAGGAGTTCAACAAAGGGGGAGAAAACTGACTACACCATGAAAATCCAAGAACTACAAAAGCAAGTAGCCATGGATAAGGAAGAAGAACAGAAATTACAGGATGACCGGGACAATTTTCTTAATCTGGCATTGGAGGGATATAAACATTGTTTAGTCATAGGTGACAAGTATGATGTGCGAGTGGTGTTTCGAATCGTTTCCTTGTGGTTCAGTCTTTCTTCTAGAAAACATGTTGTAAATAGCATGCTTAGCACAATTGATGAGGTTCAATCCTTCAAATTTATACCGTTAGTATACCAAATTGCTTCTAGAATGGGTAGCTCCAAGGATGGTCAAGGACCTCTTAATTTCCAGTTTGCTTTGGTTTCTCTTGTGAAGAAAATGGCTATTGATCATCCATACCATACAGTACTTCAACTTCTGGCCCTGGCAAATGGTGACCGTATCAAGGATAAACAGCGTAGTAGAAGTTCATTTGTGGTTGATATGGACAAGAAACATGCAGCAGAAAACCTGCTAAATGAGTTGTCATCTTATCATGGAGCAATCATACGACAAATGAAGCAAATGGTGGATATTTATATCAAACTTGCTGAGATGGAGACAAAGAGAGAGGATACCAATAAAAGAATGACACTACCTAGGGATTTACGTAATCTCCCAGTGCTAGAACTTGTACCTGTAGTGACAGCTACCATTTCAATTGATCGTAGTTGTCAATATCATGAAGGCTCTTTTCCTTACTTCAAAGGATTAGGAGATTCTGTTATGATAATGAATGGTATAAATGCTCCTAAAGTGGTTGAATGCTTGGGTTCTGATGGCTGCAGATATCGGCAACTTGCAAAATCTGGAAATGATGACTTAAGACAGGATGCTGTAATGGAACAATTCTTTGGTTTAGTTAACACATTCCTAAGGAACCATCAAGATACATGGAGAAGAAGGCTAGGTGTTCGGACTTACAAGGTTGTTCCTTTTACTCCAAGTGCTGGTGTTCTTGAATGGGTTAATGGAACTCTTCCTCTCGGTGAATATCTTATAGGGAGCATGAGAAATGGTGGTGCGCATGGTCGCTATGGAGTAGGGGATTGGCCATTCTTTAAATGTCGAGAGCACATGGCAAATGAAAGGGACAAGCGCAAAGCATTTCAGGAAGTTTGCAGGAATTTCAGGCCTGTGATGCATTTCTTTTTCTTGGAGAGGTTCTTACACCCAGCTGAGTGGTTTGAAAAGAGACTGGCATATACCCGAAGTGTTGCTACCAGTTCTATGGTTGGATATATTGTTGGCCTTGGAGATCGGCATTCAATGAACATTTTAATTGATCAGACTACTGCAGAGGTTGTTCACATTGATCTTGGTGTTGCTTTCGAACAAGGCTTGATGCTTAAGACCCCAGAACGGGTTCCATATAGGCTCACAAGAGATGTAATTGATGGAATGGGTGTAACTGGTGTAGAGGGGGTTTTCAGAAGATGTTGTGAGAAAACACTTTCTGTTATGCGGACAAACAAAGAGGCATTACTTACAATTGTGGAGGTGTTTATCCATGATCCTCTTTATAAGTGGGCTCTTTCTCCTCTGAAAGCTTTGCAGCGTCAAAAGGAAATGGATGTTGATTTGGATACAAGTTTGGAGGAACCTCAAAATGAGTATGAAGGAAATAAAGATGCTGCACGTGCACTTTTGCGTGTAAAACAAAAGCTGGATGGGTATGAAGATGGTGAAATGCGAAGTATCCATGGGCAGGTACAGCAACTCATCCAAGATGCAATAGATTCTGAGCGATTGTGCCAAATGTTTCCTGGTTGGGGAGCTTGGTTATGA 5385 0.4007 MTVLIKHHFASIFSISMALHCSKKPGAERGTLVLQSSILDFGQISENERDKLIKRHMVSIVSCILSLCSCSSDPVVPFFSKDIVSLEIQTIVDGFLDLDGSHTTAAVADKINIFRPDRVFMFLVETHYKITAASHFRHKCHRLSGIEVLISVLGQRVTALSTSNYLFNLIGPLIECPALQDQCCRILSALLLSFKKHLTADITRMLGEQLQFLVSKLVVCCVPAERKESHDSSVSRALSLLHMLTLDSDPTLHDYVKELEPFPELKIFDETRNFHEELCQTYSIRDHILKFVKRSCYLPPRLLLSSLQALHKKLLVEETFQRRGRSEGHFKDKYWHGDHEIVHAVWTLVHMCGSDDANGVRELVSDFISRVGAGDPHSVVFHLPGKSTHIHPSKSIDNCSVGETSYNIDVCISEELLVVLMKLLMKYLMDDSVKIVDMASQTLRGILSTERGQKALQSFDSYQKSLVEIHSKGVNIELVENFLLDLDRKSKVEKISLEKSTVWLTDGKSFETWVCPLVYSLIVYCNDVVLRLCQDMVLLKAEAAELLLPSIFVNIAARKDMEIDLHKLISLQLKEHIFVKSNKMIKSIQVILNCLNELRVCYVMERSSLVPSRHDVSKNSRAPNNSSKSRSTPAKTRQRQSAVVSSGLAESTSSWEKVYWLSVDYLLVAKAAVSCGSYFTSVMYVEHWCEEEFKALTVGGPDFSHNEMLPAHIEILVSAVTRINEPDSLYGILQCHKLTSQVITFEHEGNWGKALEYYDLQVQSGVLLPKDSSSRSLSLEQAGTAKSSYFASEIEMKQGRAYKGLIRSLQQIGCTHVLDMYCQGLTSSKEELQYDKEFAELQYESAWRAGNWDFSLPCVGTSFPPTQNIKRDQFNENLHSCLRALQEGDLSDFQRKLRDSKQELVWSVSHASEESTEYIYLTIIRLQMLYHLGMAWDLRWRICQDDSRKFSVQKRNVSLELVIPSIEQLSWLDMDWCSILQRTQLHMNLLEPFIPFRRVLLQTLSCRDNMLQHLLQSATTLRKGSRFSQAAGALHEFKSLCVGTKEQHSSSYWLGRIEEAKLFRAQGQNEMAINLGMYISQNYQSNEEASDVYRLIGKWLAETRSSNSRTILEKYLKPAVSITEDVKTADKKAMGRRCQTHFHLAHYTDALFRSHEERLNSNEWQSAMRLRKHKTVELEALIKRLRSSTKGEKTDYTMKIQELQKQVAMDKEEEQKLQDDRDNFLNLALEGYKHCLVIGDKYDVRVVFRIVSLWFSLSSRKHVVNSMLSTIDEVQSFKFIPLVYQIASRMGSSKDGQGPLNFQFALVSLVKKMAIDHPYHTVLQLLALANGDRIKDKQRSRSSFVVDMDKKHAAENLLNELSSYHGAIIRQMKQMVDIYIKLAEMETKREDTNKRMTLPRDLRNLPVLELVPVVTATISIDRSCQYHEGSFPYFKGLGDSVMIMNGINAPKVVECLGSDGCRYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHQDTWRRRLGVRTYKVVPFTPSAGVLEWVNGTLPLGEYLIGSMRNGGAHGRYGVGDWPFFKCREHMANERDKRKAFQEVCRNFRPVMHFFFLERFLHPAEWFEKRLAYTRSVATSSMVGYIVGLGDRHSMNILIDQTTAEVVHIDLGVAFEQGLMLKTPERVPYRLTRDVIDGMGVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKEMDVDLDTSLEEPQNEYEGNKDAARALLRVKQKLDGYEDGEMRSIHGQVQQLIQDAIDSERLCQMFPGWGAWL* 1795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2683 1794 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1467 1482 IPR018936 GO:0016301
Psa5g2683 1794 ProSiteProfiles FAT domain profile. 667 1331 IPR014009 -
Psa5g2683 1794 Gene3D - 1568 1757 IPR036940 GO:0016301
Psa5g2683 1794 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1437 1750 IPR000403 -
Psa5g2683 1794 SUPERFAMILY Protein kinase-like (PK-like) 1369 1723 IPR011009 -
Psa5g2683 1794 ProSiteProfiles FATC domain profile. 1762 1794 IPR003152 GO:0005515
Psa5g2683 1794 Pfam FATC domain 1765 1794 IPR003152 GO:0005515
Psa5g2683 1794 Coils Coil 1193 1220 - -
Psa5g2683 1794 SMART pi3k_hr1_6 1464 1758 IPR000403 -
Psa5g2683 1794 SMART FATC_2 1762 1794 IPR003152 GO:0005515
Psa5g2683 1794 CDD PIKKc_ATM 1434 1711 IPR044107 GO:0004674|GO:0006281|GO:0006974
Psa5g2683 1794 Gene3D - 1362 1522 - -
Psa5g2683 1794 Pfam FAT domain 839 1249 IPR003151 GO:0005515
Psa5g2683 1794 PANTHER SERINE/THREONINE-PROTEIN KINASE ATM 2 1794 - -
Psa5g2683 1794 Pfam Phosphatidylinositol 3- and 4-kinase 1470 1710 IPR000403 -
Psa5g2683 1794 PANTHER SERINE/THREONINE-PROTEIN KINASE ATM 2 1794 IPR038980 GO:0004674|GO:0006974
Psa5g2683 1794 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 1604 1624 IPR018936 GO:0016301
Psa5g2683 1794 MobiDBLite consensus disorder prediction 613 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2683 Psa-Chr5 204144381 204183338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2683 1583 1720 Lipid Metabolism Gene Families AT5G09350 24.324 4.10e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2683 K04728 - gmx:100788458 3026.5