Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2672 ATGAAAATTCAGTTCATCTTCTTGTTCTTCTCACTCTCTTTTTTCCATGGTTCTATAGCCACCATTGGCAACAAAGGAATCACTCAAACACAAGAATATTCTTTCAAACAAAAGACAAACCCTTTCACTCCCAAAGCCTCACTCATTCGTTACTGGAACACACGAATCTCTAACAAACTTCCAAATCCAATCCCTAATTTCTTTCTCTCTAAAGCTTCCCCTCTCACACCACAACATTATGCTAACCTAGTAAATCTCCTTAAACAAAAGCCCTTCTCTGCAAATTTCCATAATTCCCTCTGCTCCACACCATACTTACTCTGCTCCTTCGACCACCCAAGCGAATATTACCAATCCAAAAAAACTAACAAACCCGATGCCAACTTCGCAGTCTACTCAAACAAAAAATTCGCAACTTACGGATCGTCTCGACTCGGTGGAGTCGACTCGTTCAAAAACTATTCAAACGGGTTAAACACAAACAACGACTCGTTCAAGAAATACAGCACAACCTCGACTCGCCATAGCGGACAATTCAACAGCTACGCGGAAAACGGCAATGTAGCTAACACAAACTTCACCAGCTACGGTTCCGGTTCATCTTCCGGCACCGGCGAGTTCAAAAGCTACGATAAACTCGTCAATGACCCTAACCTAGGTTTCACTACCTACGATTCTTCTGCTACAAACCACAAACTCTCTTTCTCAAGCTACGGCAATGAAACAAACTCCGGATCAGAATCATTCAACAGCTACGGAAAACGCGTTCGCAGCGGCAACAGCGATTTCATCAATTACGCTGTTAGCTCCAACATTCTTCAATCATCTTTCACTGGCTACGGTGAATTAGGAACCGGAGCCGCCAATGATTCTTTCACATCGTACAGCTTCAACGGTAATAATCCCCGGAGCACTTTCAAAACCTACGGCGCCGGTTCCGTTTCAGGCTCCGATACTTTCGTCAGTTACCGGAATCGCGCCAACGTCGGCGATGATTCATTTCAAAGCTACGGTTCAAAATCAAAATCCGGCGCTGCCACATTCACGAACTATGGGCAATCGTTTAACGAAGGAAACGACACTTTCACTGAATATGGAAAAGGTTCGTCAGGTAAAACCGCGTTTGGATTCAAAACTTACGGATTGGGACGCGCGTTCAAAGGCTACAACAAAAACGGCGTGTCGTTTTCTAGCTATAACAATTTCAGCACGTTCAGTGGCAAAATCGTGAATAAATTCGTCGAGCCGGGTAAGTTTTTCAGAGAGTCAATGTTGAAAGAAGGAAATGGGATGGTCATGCCAGACATTAGGGATAAAATGCCTGAAAGGTCGTTTTTACCCCTGTCTATTTCTTCGAAATTACCTTTTTCATCCTCGATGTTGGAGGATATAAAGGAAGCTTTCCACGCGCGGGATGGTTCGGCAACAGAGCGCGTGATTAAAAACGCGCTTGGAGAGTGCGAAAGGGGACCGAGCATGGGCGAGACAAAACGGTGCGTTGGATCCGCTGAGGCTATGATTGATTTTGCAGTTTCTGTATTGGGTCCCAATGTGGTTGTGAAAACAACTGAGAGTGTAAATGGGTCAAAAAATAATGTGATGATTGGAAAAGTCTACGGAATCAACGGTGGAAAAGTGACTAAATCAGTTTCATGTCATCAAACTCTGTATCCTTACTTATTGTATTATTGTCACTCTGTCCCCCAAGTTAGAGTTTATGAAGCTGAAATTCTTGACGTGGAAACTAAGTCAAAGATTAATCATGGGGTTGCCATCTGTCATCTGGACACGTCATCATGGGGCCCACAGCATGGTGCTTTCATAGCTTTGGGGTCGGAACCTGGAAAAATTGAGGTTTGCCATTGGATTTTCGAAAATGATATGACTTGGACCATTGCCAGTTGA 1905 0.4388 MKIQFIFLFFSLSFFHGSIATIGNKGITQTQEYSFKQKTNPFTPKASLIRYWNTRISNKLPNPIPNFFLSKASPLTPQHYANLVNLLKQKPFSANFHNSLCSTPYLLCSFDHPSEYYQSKKTNKPDANFAVYSNKKFATYGSSRLGGVDSFKNYSNGLNTNNDSFKKYSTTSTRHSGQFNSYAENGNVANTNFTSYGSGSSSGTGEFKSYDKLVNDPNLGFTTYDSSATNHKLSFSSYGNETNSGSESFNSYGKRVRSGNSDFINYAVSSNILQSSFTGYGELGTGAANDSFTSYSFNGNNPRSTFKTYGAGSVSGSDTFVSYRNRANVGDDSFQSYGSKSKSGAATFTNYGQSFNEGNDTFTEYGKGSSGKTAFGFKTYGLGRAFKGYNKNGVSFSSYNNFSTFSGKIVNKFVEPGKFFRESMLKEGNGMVMPDIRDKMPERSFLPLSISSKLPFSSSMLEDIKEAFHARDGSATERVIKNALGECERGPSMGETKRCVGSAEAMIDFAVSVLGPNVVVKTTESVNGSKNNVMIGKVYGINGGKVTKSVSCHQTLYPYLLYYCHSVPQVRVYEAEILDVETKSKINHGVAICHLDTSSWGPQHGAFIALGSEPGKIEVCHWIFENDMTWTIAS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2672 634 ProSiteProfiles BURP domain profile. 419 633 IPR004873 -
Psa5g2672 634 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 2 633 - -
Psa5g2672 634 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 2 633 - -
Psa5g2672 634 Pfam BURP domain 419 631 IPR004873 -
Psa5g2672 634 SMART BURP_2 417 633 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2672 Psa-Chr5 203568397 203571740 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2672 - - lja:Lj1g3v0411530.1 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2672 5 203568397 203571740 Psa5g2672 5 203568397 203571740 ECH