Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2346 ATGGCTTCTCCACCAGACACAAGCAAAACCGTAAAGCTAGAACGTTACAATAGCTACATCAGAAAAGTTAACAGCACAAAACTCCTTAACGCATCTTCCAAACTTCTCTTCCGAGCCACACTCTTGATAGCACTCGTCCTCGTTTTCTTCTTCACTTTCAATTACCCTCCACTCTCCGACTCCACCAACCACCACTTCCACACTCATTCCCACTTTCTCACCTCCGCATTCGGCGGCGGCGGTGCATGGGAACGCCAAGTCCGTCACTCCGCTACACCGCGCCGTCCTAATGGTTTCACAGTACTTGTAACCGGTGCAGCCGGTTTCGTCGGTTCTCACTGTTCACTCGCTCTTAAAAAACGAGGTGACGGAGTTTTAGGTTTAGATAATTTCAACACCTATTACGACCCGTCGTTGAAGCGCGCGAGACAAGCTTTATTAACTCAGCATCAAATCTTCATTGTTGAAGGTGACCTAAACGACGCGCCGTTGTTAACCAAACTCTTCGATGTAGTTCCGATTACTCACATCCTTCATCTCGCTGCACAAGCCGGTGTTCGTTACGCCATGCAAAATCCACAATCCTACATCAAATCCAACATTGCTGGTTTCGTCAATCTTCTAGAAGTTTCCAAAGCAGCCAATCCTCAACCGGCGATCGTCTGGGCTTCATCAAGCTCAGTTTACGGTCTCAACACGGAGAATCCATTCTCAGAACTTCACCGGACAGATCAACCGGCGAGTCTCTACGCCGCAACTAAAAAAGCCGGCGAGGAAATCGCTCATACTTATAATCACATCTACGGTCTCTCCCTCACCGGACTCCGTTTCTTCACGGTGTACGGTCCTTGGGGAAGACCAGACATGGCGTATTTCTTCTTCACCAAAGATATTCTTCATGGAAAAACCATCGATGTTTACCAGACGCAGGAAGGGAAGGAAGTCGCGCGTGATTTCACCTACATCGACGATATCGTGAAAGGCTGCGTAGGAGCTTTGGACACAGCGGAGAAAAGCACCGGAAGCGGCGGAAAGAAGAAGGCACCGGCGCAATTAAGAATCTACAATCTCGGCAACACATCGCCGGTGCCGGTGGGGAAACTTGTAACGATTCTAGAAAACTTGCTGAGCACGAAGGCGAAGAAACACATCCTCAAGATGCCACGAAACGGCGACGTTCCGTATACGCACGCGAATGTGACATTAGCTTACACAGATTTCGGGTACAAACCAACAACGGATCTTTCAACGGGTTTGAGAAAATTCGTAAAGTGGTACGTTCGTTATTACGGAATTCAGTCAGGGGTAAAAAAGGAAAATCCTCTCAATAACGAACTACCCGAGGATTCCGCTTGA 1356 0.483 MASPPDTSKTVKLERYNSYIRKVNSTKLLNASSKLLFRATLLIALVLVFFFTFNYPPLSDSTNHHFHTHSHFLTSAFGGGGAWERQVRHSATPRRPNGFTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNTYYDPSLKRARQALLTQHQIFIVEGDLNDAPLLTKLFDVVPITHILHLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVSKAANPQPAIVWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKTIDVYQTQEGKEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKKAPAQLRIYNLGNTSPVPVGKLVTILENLLSTKAKKHILKMPRNGDVPYTHANVTLAYTDFGYKPTTDLSTGLRKFVKWYVRYYGIQSGVKKENPLNNELPEDSA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2346 451 Pfam NAD dependent epimerase/dehydratase family 101 339 IPR001509 -
Psa5g2346 451 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Psa5g2346 451 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Psa5g2346 451 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Psa5g2346 451 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Psa5g2346 451 Gene3D - 278 426 - -
Psa5g2346 451 PANTHER EPIMERASE-RELATED 1 442 - -
Psa5g2346 451 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 94 432 IPR036291 -
Psa5g2346 451 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 1 442 - -
Psa5g2346 451 Gene3D - 102 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2346 Psa-Chr5 181785916 181788750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2346 1 451 Miscellaneous Gene Families AT3G23820 79.870 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2346 K08679 - zju:107422361 800.816