Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2342 ATGAATTGTTCAATGAAAGGTGAAGCGAAAGAGGAGGAGGGGGTTGGTTTCAGTCGACTTGCCTCCTTCGTATACGAATACGAACCCTTGTCTCAAGAAGATCTCGAAGCAATTGAAGCAAGTCTTCAATCTTCTCTTCCCACCACCACCACCACCATCACCACCACCTCTACTACCACCACCACCACCACCACCAATAACAACAATAAACGCCCCATCACCTCTCACTCTCCCACTCGCCGCAGCCGCCGCCGCTTGCCTACGTCGCTCATCGCTCTTCAACTCCCACGTTCGCCGTCTTTCTCGCCTTCTCCAGGCCATTCAAAGATGCGGTTGCCTGTAATGAAGTTTTGTGGGAAAATTATGTATAGCAGGACTTTTAATGATGTTGAGAAAGCTGTAACAAAGTTCCTAAAAATTATTGAAGAAAAGAAAAGTGAGATGATGCAAATTGCAATTGGATTTGACATTGAGTGGAAACCCACCTTCAGAAAAGGTGTTCCACCTGGGAAAGTAGCAGTGATGCAGATATGCTGTGACACTAGTCAGTGCCTTGTTCTTCATCTAATTCATTCTGGAATCCCTCAAAATCTTCAGCTTTTACTTGAAGATTCCACAGTTTTGAAGGTTGGAGCTGGAATTGGCGGTGATGCTACTAAGGTTTCTAGAGATTATGACATATCCCTTAAAGGTGTAGAAGATCTTTCTTTTCATGCTAATCAAAAGCTAGGTGGAGGTCCTCATAAGTGGGGTCTTGCATCGTTGACCGAAAAACTTCTATCAAAACAGCTTAAGAAGCCCAGCAAAATAAGAATGGGGAATTGGGAGACTCCTATTTTGTCTAAGGAACAACTAGAGTATGCTGCCACAGATGCTTTTGCTTCTTGGTTTCTCTATCAGACTATTAAAGATCTCCCGGATGTGCAGGAGGCTACCGACAAGAGTAGTGAAGTTGATGCTGTGCCGCAACAATGA 975 0.4441 MNCSMKGEAKEEEGVGFSRLASFVYEYEPLSQEDLEAIEASLQSSLPTTTTTITTTSTTTTTTTTNNNNKRPITSHSPTRRSRRRLPTSLIALQLPRSPSFSPSPGHSKMRLPVMKFCGKIMYSRTFNDVEKAVTKFLKIIEEKKSEMMQIAIGFDIEWKPTFRKGVPPGKVAVMQICCDTSQCLVLHLIHSGIPQNLQLLLEDSTVLKVGAGIGGDATKVSRDYDISLKGVEDLSFHANQKLGGGPHKWGLASLTEKLLSKQLKKPSKIRMGNWETPILSKEQLEYAATDAFASWFLYQTIKDLPDVQEATDKSSEVDAVPQQ* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2342 324 Pfam 3'-5' exonuclease 138 303 IPR002562 GO:0003676|GO:0006139|GO:0008408
Psa5g2342 324 CDD WRN_exo 129 303 - -
Psa5g2342 324 PANTHER 3-5 EXONUCLEASE 37 309 - -
Psa5g2342 324 MobiDBLite consensus disorder prediction 49 86 - -
Psa5g2342 324 SUPERFAMILY Ribonuclease H-like 153 302 IPR012337 -
Psa5g2342 324 SMART 35exoneu6 138 307 IPR002562 GO:0003676|GO:0006139|GO:0008408
Psa5g2342 324 MobiDBLite consensus disorder prediction 49 75 - -
Psa5g2342 324 Gene3D - 106 310 IPR036397 GO:0003676
Psa5g2342 324 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 37 309 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2342 K22807 - gmx:100801291 400.979