Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2341 ATGAGTACGGTTGACAAGATGCTCATCAAGGGCATCCGAAGTTTCGATCCCGAGAACAAAAACGTCATCACCTTCTTCAAACCCCTAACCCTAATCGTCGGTCCCAACGGTGCCGGCAAAACCACAATCATAGAATGCTTGAAGCTTTCCTGCACCGGTGAGTTGCCGCCAAATGCTAGGTCCGGTCACAGCTTCATTCATGATCCCAAGGTTGCCGGTGAAACGGAAACCAAGGGACAGATTAAGCTCCGGTTCAAAACCGCTGCCGGTAGAGACGTGGTTTGCATTAGGTCTTTTCAACTCACGCAAAAAGCATCCAAGATGGAGTACAAAGCAATCGAGAGTGTGCTTCAAACTATTAACCCTCATTCCGGCGAGAAAGTTTGCCTTAGCTATAGATGTGCTGATATGGATAGAGAGATTCCTGCGCTGATGGGTGTTTCGAAGGCCATTTTGGAAAATGTTATATTTGTTCATCAAGATGAAGCCAATTGGCCACTCCAGGATCCTTCCACGTTAAAAAAGAAGTTTGATGATATCTTTTCAGCTACTCGTTACACAAAGGCACTGGAGGTTATAAAGAAACTTCACAAGGATCAAGCTCAAGAAATAAAGACTTACAAGCTGAAACTAGAAAATCTTCAAACTCTGAAAGATGCAGCTTATACGCTTCGGGAAAGCATTGCACAGGATCAGGAGAAAACAGAATCTCAAAAAGATCAGATACAACAGTTGGATGGAAGCATTAAAGATTTGGACACTAAAATTAATCATGGGGAAAAGACATTGAAACATTTGCTGGAGCTACAGAAGCAAATATCAGCTAAAACTACAGAACGAAGCACTCTATTAGAGGGACAAGAAAGGCAACATGCTGATCTAGCTGAGGAGTATGAAGAAACTGATGAAGAGTTGATGGAAATGAAGACCAAGTTTGATGAAAGGATTGCAATTTCAAGTTCACAAATAAGGAAGTTGGAAAGAGAGAAGAATGACATTAGCATAAAACGTCCTGCCCTTAGAAATGCCATCAATGAGTCTATCGGGGAGATCAGCAAGCTACAAACTGAAGAAGAAGCTCACAAGTCTCTGAAGAATGAACAAGATACTTGCATTCAAAATATTTTTTCCAGTTATAACTTAGGGTCTCTTCCAAAGCCACCCTTCAGTGCTGCAGATGGTTTGAACCTCACTAATCGTATAAAATCAAGGTTGAGGGATCTTGAGAAGGATCTTGAACATAAAAAGAAAGCAAATAAAACTGAACTCAAAATGGCATGGGATTCCTACTTGAGTGCAAGTGAAAGCTGGCAAAATACTGATGCTAAATTACAAACTAAGAGAGAGAACAAGGATGGAATTATGAAGCGCTTTGAAGAGAAGAACGGCGAGCTTGAGTCATTTGAACTTGAAATATCTAATATAGATGTTTCTCATTTAGACGAGCGAGAAAGAAAATTGCAATTTCAGCTGGAGAGGATGACCAAGCAACGTGATGAAAAAGAATTTGAACTAAAGAAAAGTCAAATTGAAAAGGAAGTCCTTAATGTGGAGCAAAAGATTAAAGTTGTCAATCGAGAGTTTGCCGCCATGGCTACTGATTCAAAGGAGAGAGGAAGATTATCTCTTATGAAGTTAGATTTGGAGACAAAGAAGAAACAACATAAAAAGATAATTGATGGCCAGAAAGATAAAATAAGAAGGGTGCTACAGGGGAGGATTCCTCCTGATAAGGACATTAAGAAGGAAATCACACAAGCATTAAGGACTGTTGCAGCCGATTTTGATGAGCTGAATGTGAAGTATCGGGAAGTTGACAAGGAAGTAAATGTTTTGCAGATGAAAATACAAGAAGTAGACAATAACCTATCTAAACACCACAAGGATATGGAATCAAGAAAGAGATTTATTGAATCCAAGCTTCAGTCTTTGGATCAGCAGTGTTCTGGAATCGATTCTTATCTCAAACATTTAGAGTCTGTCAAGGAGAAAAGAGATGTACAGAAAAGCAAATATAACATTGCCGATGGTATGAGACAAATGTTTGATCCTTTTGAAAGGGTTGCCAGAGCTCATCATATATGCCCCTGCTGTGAGCGTTCTTTCTCGCCAGAAGAAGAAGATAGTTTTGTCATGAAGCAAAGAGTGAAAGCTGCCAGTTCAGCTGAACATATGAAAGTTCTAGCTGTGGAGTCCTCAAGTGCAGACTCTGATTATCAGCAGTTGGACAAGCTTCGTATGTGGTATGAAGAATATGTTAAACTTAGCAAGGAGACAATCCCTAAGGCTGAAAAGGAACTCCAGCAAGTCAAGGAAGAGTTGGATCATAAATCCCAGGCACTTGATGATGCTTTAGGTATTTTAGCTCAAGTGAAGACTGACAAGGATTTGGTTGAGATGGTGCTGCAACCTGTTGAAAACGCTGATCGAATTTTCCTTGAAATTCAAAGTTTGCAAAAGAAAGTTGAGGATTTAGAAAGTGAGCTTGGTTGTGGAGGACCAGGAGTGAGGACTCTAGAAGAAATTCAATCCGAGCTCGCTGCAGTGCAGGGAACAAAGGACAATTTGAAAACCGAGTTGGAGAAATTGGCGGATGAGCAGATGGATATGCAGAAAGATATATCAAGTATTCAAACTCGGCTCTTGAAAGCAAGGGATGATAAAATGAATGCAGAAAAGAAATTGCAAGGTGGTAAAAGATTGGAAGAAGAATTAGAATGCTTAAAGGAAGAAATGGTGCAAATTGATCTTGATGTGAAGAGTCTGGTTGAATCCGTCGAACCTTTATCCATGCACAAAGATAAAATTCTTGCTGACTATAATGAACTGAAGATTAGACTTGACCTCGAGATTGAGAATCTGGTTGAAAAAAAGAGAATCTTTCAGCAAGAAGCCGAAGCAGTTTTTAGAATGACTTCTAAGATCATAGAGTACTCTAATTTAAAGAAAGGAGACAAGTTGAAGGAGTTGCAGGAAAAGAAATCTCTATCAGAATCTCAACTGCAAAGTTGTGAAACCAGGATGCAGGAAATTATAGATGAACTAGACAAAAGGAAAGATTTGATGCGGAATACTGATCTGCTTAAAATAAAAATTGAGGACAACTTAAAGTACAGAGAAACAAAGGCTAAAGTAGATAAGCTATCATATGAAGTTGATACACTTGAAGAAAATATGTTGAAGGTTGGTGCAGTTTCCACAATTCAGACGGAACTTGCAAAATTATCCAAGGAGAGGGAGAGGCTTCTTGAGGAGTTAAACAGGTGCAAAGGAACAGTGTCTGTTTACCAGAGCAATATTTCCAAAAATAAGATTGATCTAAAGCAGGCCCATTACAAGGACATAGATAGGCGATATTTTGATCAGCTTATTCAGCTTAAGACAACTGAAATGGCAAACAAGGACTTGGACAGATACTACAATGCACTTGATAAAGCACTGATGCGCTTCCACACAATGAAAATGGAAGAAATCAACAAAATTATAAGAGAATTGTGGCAACAGACTTATAGAGGACAAGATATTGACTGCATTAGTATTCATTCTGATTCTGAAGGTGGTGGCACCCGGTCCTACAGTTACAGGGTTCTCATGCAAACTGGTGATGCTGAGTTAGAAATGAGAGGAAGATGTAGTGCAGGTCAGAAGGTACTGGCATCTCTTATCATACGATTAGCCTTAGCGGAAACATTTTGCCTCAATTGTGGAATTCTTGCATTGGATGAACCAACCACAAATTTAGATGGACCAAATTCTGAAAGTCTGGCTGCTGCTATCCTAAGGATCATGGAGGACAGGAAAGGCCAGGAAAATTTTCAGCTAATTGTAATTACTCATGATGAGCGTTTTGCTCAACTGATTGGTCAGCGCCAGCATGCAGAGAGATATTATCGAGTCGCAAAAGATGACTATCAGCACAGTATAATCGAATCACAGGCAATATTTGACTGA 3951 0.3966 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGRDVVCIRSFQLTQKASKMEYKAIESVLQTINPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYTLRESIAQDQEKTESQKDQIQQLDGSIKDLDTKINHGEKTLKHLLELQKQISAKTTERSTLLEGQERQHADLAEEYEETDEELMEMKTKFDERIAISSSQIRKLEREKNDISIKRPALRNAINESIGEISKLQTEEEAHKSLKNEQDTCIQNIFSSYNLGSLPKPPFSAADGLNLTNRIKSRLRDLEKDLEHKKKANKTELKMAWDSYLSASESWQNTDAKLQTKRENKDGIMKRFEEKNGELESFELEISNIDVSHLDERERKLQFQLERMTKQRDEKEFELKKSQIEKEVLNVEQKIKVVNREFAAMATDSKERGRLSLMKLDLETKKKQHKKIIDGQKDKIRRVLQGRIPPDKDIKKEITQALRTVAADFDELNVKYREVDKEVNVLQMKIQEVDNNLSKHHKDMESRKRFIESKLQSLDQQCSGIDSYLKHLESVKEKRDVQKSKYNIADGMRQMFDPFERVARAHHICPCCERSFSPEEEDSFVMKQRVKAASSAEHMKVLAVESSSADSDYQQLDKLRMWYEEYVKLSKETIPKAEKELQQVKEELDHKSQALDDALGILAQVKTDKDLVEMVLQPVENADRIFLEIQSLQKKVEDLESELGCGGPGVRTLEEIQSELAAVQGTKDNLKTELEKLADEQMDMQKDISSIQTRLLKARDDKMNAEKKLQGGKRLEEELECLKEEMVQIDLDVKSLVESVEPLSMHKDKILADYNELKIRLDLEIENLVEKKRIFQQEAEAVFRMTSKIIEYSNLKKGDKLKELQEKKSLSESQLQSCETRMQEIIDELDKRKDLMRNTDLLKIKIEDNLKYRETKAKVDKLSYEVDTLEENMLKVGAVSTIQTELAKLSKERERLLEELNRCKGTVSVYQSNISKNKIDLKQAHYKDIDRRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDCISIHSDSEGGGTRSYSYRVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAAAILRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDYQHSIIESQAIFD* 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2341 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1286 IPR027417 -
Psa5g2341 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 276 IPR027417 -
Psa5g2341 1316 Coils Coil 323 343 - -
Psa5g2341 1316 Coils Coil 480 527 - -
Psa5g2341 1316 Coils Coil 987 1007 - -
Psa5g2341 1316 Coils Coil 808 828 - -
Psa5g2341 1316 Coils Coil 1065 1092 - -
Psa5g2341 1316 TIGRFAM rad50: rad50 3 1310 IPR004584 GO:0000723|GO:0005634|GO:0006281|GO:0016887|GO:0030870
Psa5g2341 1316 PANTHER RAD50 1 1313 - -
Psa5g2341 1316 Coils Coil 398 418 - -
Psa5g2341 1316 Gene3D - 1064 1314 IPR027417 -
Psa5g2341 1316 Gene3D - 4 299 IPR027417 -
Psa5g2341 1316 Coils Coil 1038 1058 - -
Psa5g2341 1316 Coils Coil 839 918 - -
Psa5g2341 1316 Coils Coil 602 622 - -
Psa5g2341 1316 Coils Coil 284 311 - -
Psa5g2341 1316 CDD ABC_Rad50 4 170 IPR045171 -
Psa5g2341 1316 Pfam AAA domain 7 256 IPR038729 GO:0140664
Psa5g2341 1316 Coils Coil 627 647 - -
Psa5g2341 1316 Coils Coil 197 217 - -
Psa5g2341 1316 Coils Coil 937 957 - -
Psa5g2341 1316 CDD ABC_Rad50 1205 1308 IPR045171 -
Psa5g2341 1316 Coils Coil 753 780 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2341 K10866 - gmx:100818545 1924.06