Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2327 ATGCCGCAAATTCCTATCAGCTCCTCCAACCATGTTTCGTCAACCTTCTTCTATTCCATCAATTCCCTTCCTCGCTCCAAATTTGCCACCACCGCCAACGTTTCTCCAACCTCTTCTTTTCGCGTCTTTTGCCAAACTCAATCCAAGACAGAGAACACTGAGATAAGAAGATTTTCACCATTACTAGAAAGTTCTGGTAATGGTGCCATGGCTTTTGATGATTGGAAAGCAGTTCCTGATATATGGAGAACTTCTGCAGAGAATTTTGGTGATAAAATAGCTTTGATAGATCAATATCATGATCCTCCTTCAACTATGACATACAAACAGTTGGAAGATGCAATATTGGACTTTGCTGAGGGATTGAGAGTTATTGGAGTAAAACCTGATGAGAAGATTGCTCTTTTCGCTGATAACTCATGTCGCTGGCTCGTAGCAGATCAAGGCATGATGGCAATTGGAGCAATCAATGTGGTAAGAGGTTCAAGGTCATCAACTGAAGAACTGCGGCAAATATACAGCCACTCTGAAAGTGTTGCACTAGCTGTAGACAATCCTGAAATGTTTAATCAGATTGCAAAACCATTTTATTCCAAGACTTGTATCAGATTTATTATTCTACTATGGGGAGAAAAATCAAACCTTGTCAGTGAAGGAAATAAAGAGGTGCCAATCTATACATTCATGGAAGTCATACATTTCGGGCGAGAAAGTCGCAGGGCATTGTCTGATTCCCATGATGGAAGACAACATTACAAGTTTGAAACAATAAAATCTGATGACATTGCTACTCTTGTGTACACAAGTGGTACTACTGGAAATCCAAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATCAAACACTTATCAGATGTTGTACCTACTAAAGTTGGGGATAGATTACTAAGTATGTTACCTCCCTGGCATGCATATGAAAGAGCTTGTGAGTATTTCATTTTCTCGCGCGGTCTAGAATATATTTACACTACTGTGAGAAACTTGAAGGATGATTTGGGAGTTTATCAGCCACATTTGATGGTTTCTGTTCCTTTAGTTTTTGAAACTTTGTACAGTGGGATCATGAAGCAGATATCTACAAGCTCGCGTATTAGAAAGCATGTTGCTCTCACATTCATAAGGGTCAGCTTAAGATACATGGAATGTAAGCGAGTTTATGAGGGTAAATGTTTAACAAAGAATCAGAAATCACCTTCATATCTCTATGCAATGTTGGATTGGCTATGGGCAAGAACTATGGCTGCAATATTATATCCAGTTCATATGCTGGCAAATAAACTGGTTTACAGTAAAATCCGTTCAGCCATTGGAATATCAACGGCTGCAATAAGTGGTGGTGGTAGCTTACCTTCTCACGTCGACAAGTTTTTTGAGGCTATTGGTGTGAACTTGCAGAACGGATATGGTTTAACAGAAACTTCACCTGTTATTGCTGCTCGGCGACTTGGTTGTGACGTTATTGGATCTGTGGGGTATCCACTAAAGCATACAGAATTCAAGGTTGTAGATTCTGAAACTGGTGAAGTTCTTCCACCTGGCTCAAAGGGAATTTTGAAAGTCAAGGGCCCACAATTAATGAAGGGATACTACAAGAACCCTTCAGCTACAAATCAGGCCATAGATAAGGATGGCTGGCTGGATACTGGTGACATAGGTTGGATAGCTCCCCGCCATTCAGCTGGGCGGAGCCGTAATTCTGGTGGTGTAATTGTCGTTGAAGGCCGTGCTAAAGACACCATTGTGCTTTCATCAGGTGAAAATGTTGAACCGGGAGAGCTTGAAGAAGCTTCCATGAGAAGTAACCTCATACAACAAATTGTTGTCATTGGCCAGGATAAGCGACGTCTAGGAGCTGTAATTGTTCCTAACAAAGAAGAAATCTTAAAGACAGCAAGAGAATTATCAATTATAGATTCCAACAGTTCAGATGTCAGTCAGGAAAAAGTGACCAGACTAATATATAATGAATTAAAGACCTGGACATTAGGGTTTCCGTTTCAAATTGGGCCAATCCTTCTTGTAAATGATCCCTTCACGATTGATAATGGGCTAATGACACCCACGATGAAAATTCGAAGAGATAGGATTATGGCTCAATACAAGGACCAGATAGAGAACATATACAAGTAA 2157 0.4033 MPQIPISSSNHVSSTFFYSINSLPRSKFATTANVSPTSSFRVFCQTQSKTENTEIRRFSPLLESSGNGAMAFDDWKAVPDIWRTSAENFGDKIALIDQYHDPPSTMTYKQLEDAILDFAEGLRVIGVKPDEKIALFADNSCRWLVADQGMMAIGAINVVRGSRSSTEELRQIYSHSESVALAVDNPEMFNQIAKPFYSKTCIRFIILLWGEKSNLVSEGNKEVPIYTFMEVIHFGRESRRALSDSHDGRQHYKFETIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKHLSDVVPTKVGDRLLSMLPPWHAYERACEYFIFSRGLEYIYTTVRNLKDDLGVYQPHLMVSVPLVFETLYSGIMKQISTSSRIRKHVALTFIRVSLRYMECKRVYEGKCLTKNQKSPSYLYAMLDWLWARTMAAILYPVHMLANKLVYSKIRSAIGISTAAISGGGSLPSHVDKFFEAIGVNLQNGYGLTETSPVIAARRLGCDVIGSVGYPLKHTEFKVVDSETGEVLPPGSKGILKVKGPQLMKGYYKNPSATNQAIDKDGWLDTGDIGWIAPRHSAGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGELEEASMRSNLIQQIVVIGQDKRRLGAVIVPNKEEILKTARELSIIDSNSSDVSQEKVTRLIYNELKTWTLGFPFQIGPILLVNDPFTIDNGLMTPTMKIRRDRIMAQYKDQIENIYK* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2327 718 Gene3D - 73 385 IPR042099 -
Psa5g2327 718 CDD LC_FACS_like 101 705 - -
Psa5g2327 718 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 5 718 - -
Psa5g2327 718 Gene3D Luciferase; Domain 3 493 563 - -
Psa5g2327 718 Gene3D - 449 492 - -
Psa5g2327 718 Pfam AMP-binding enzyme 83 591 IPR000873 -
Psa5g2327 718 Gene3D - 586 716 IPR045851 -
Psa5g2327 718 SUPERFAMILY Acetyl-CoA synthetase-like 76 717 - -
Psa5g2327 718 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 5 718 - -
Psa5g2327 718 ProSitePatterns Putative AMP-binding domain signature. 265 276 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2327 Psa-Chr5 180191201 180200882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2327 10 718 Acyl Lipid Metabolism Gene Families AT3G23790 64.755 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2327 K01897 - gmx:100782583 1121.69