Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2319 ATGGCGTCGTTTTGCCCAACCACTCCCCAGTCTCTCTTCTCCACTTCATTTCAAAACACTTCCCGTTTTCCACATCCCACCTTTCAACCTCATCATTCCCTACTCTCCCTCCATTCTTCACACTTCTTTCGGAAGAGTGTCGGTTTACTATGGGGAAGAAACTCGCCCACCTTCAAGATACACTCTTCACTTACAGATTTTACAGTGGATGTAGCTGTAGAGGAGAAAAAGCTACCAAAAGGAGAAACTTGGTCTGTTCACAAGTTTGGTGGAACTTGTGTGGGAAGTTCAGCGAGGATAAACAATGTTGCAGATGTAATTATCAATGATGATTCTGAGAGGAAATTGGTGGTGGTGTCTGCTATGTCAAAAGTAACAGATATGATGTATGATCTCATACACAAGGCTCAATCTCAGGATAAGTCTTATATATCTGCACTGGATGCTGTTGAAGAAAAGCACACTTTAACTGCACTTGAATTATTTGATGGAGATGATCTTACTACTTTCTTAGCAAATTTGCATCAAGATATTAGAAACTTAAAGGCAATGCTTCAGGCTATGGACATAGCTGGTCATGCTACAGAATCTTTTACTGACTTAGTTGTGGGACATGGGGAGTTATGGTCTGCACAGATATTGTCTTATGCTATTAAGAAGAAAGGGATTGACTGCAAATGGATGGATACAAGGGAAGTCCTCATTGTAAATCCTACTAGTGCTGATCAAGTTGATCCTGATTACTTGGAATCTGAACGAAGACTTAATAAATGGTACTCTCGTAATCCGTCTAAGGTAATTATTGCTACTGGATTTATAGCAAGCACGCACCAAAATATTCCCACTACTCTCAAGAGAGATGGAAGTGATTTCTCTGCAGCAATTATGGGCGCTCTGTTCCGGGCACGTCAGGTCACCATTTGGACTGATGTTGATGGCGTGTACAGTGCTGATCCTAGAAAAGTTAGCGATGCCGTGATTTTGAAGACACTGTCTTATCGAGAGGCATCAGAGATGTCTTATTTTGGTGCAAATGTTTTACATCCGCGAACAATTAGTCCAGTTATTCGATATGGCATACCAGTTATAATAAGGAATATTTTCAATACCTCTGCTCCTGGAACAAAGGTCTGCCATCCCTCTACTACTGAAAATGAAGATAAGAAGATATTAATAAATTATGTCAAAGGCTTTACAACAATAGACAACTTGGCACTTGTAAATGTGGAAGGAACCGGAATGGCTGGTGTTCCAGGTACTGCCAGTACTATTTTTAGAGCAGTGAAAGAGGTTGGAGCCAATGTTATTATGATATCTCAGGCTAGTAGTGAGCATTCTATATGTTTTGCTGTGCCCGAAAAGGAAGTAAAAGCTGTTGCTGAGGCGTTGCAATCTATGTTCCAGAACGCATTGTATGCTGGGCGTCTTTCTCAGGTTGCGGTCATTCCAAATTGCAGTATTTTGGCAGCTGTTGGCCAGAAAATGGCAAGCACCCCAGGAGTTAGTGCCACCCTTTTCAATGCATTGGCTAAGGCCAATATAAATATCCTTGCTATAGCACAAGGTTGTTCTGAGTACAATGTTAGTGTTGTTCTTAAGCGGGAGGATTCTATAAAGGCTCTTCGGGCTGTCCATTCTAGATTTTATAACTCAAACACCACCATAGCAATGGGCATAATTGGACCTGGGTTAATTGGGAGCACACTCATTGATCAGCTAAGGGATCAGGCAGCAACTTTGAAAGAAGAATCAAACATTGATTTACGTGTAATGGGCATCATGGGTTCAAAGTCGATGCTCCTTGATGATTCGGGGATCGACTTAGTAAAGTGGAGCGAAATTCGAGAGGAAAAAGGCGAAGTGACCGATTTGGAAAAATTTGTTCAACATGTGCATGGAAATCATTTTATACCAAACACAGTTTTAGTAGACTGCACGGCTGATTCTGGCGTAGCAAGTCATTACAATGACTGGCTGCGCAAAGGGATACATGTGATCACTCCCAATAAAAAGGCAAATTCAGGACCACTTAATGAGTACTTGAGGTTAAGAGTTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGAGCCGGTCTTCCAATTATTAGCACATTACGAGGGCTTCTCGAAACTGGTGACAAAATATTGCAAATTGAAGGCATCTTCAGTGGGACTTTGAGTTACATCTTTAATAACTTCAAAGATGGACGAGTTTTTAGTGAGGTAGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAACCAGATCCAAGGGATGATCTGTCTGGAACTGATGTTGCGAGAAAGGTGATAATTCTTGCAAGGGAATCTGGCTTGAAGCTAGAGCTTTCTGATGTTCCCGTTGAAAATCTTGTGCCGGAACAATTAGCTAGTGCATCAGTTCAAGATTTTTTGCAGAATTTACCAAAATTTGATAAGGAGATATCAAAGAGACAAGAAGAGGCTGACACTGCAGGGGAAGTGTTGAGATACGTAGGAGTGGTAGACGTCGCAAATGAAAAGGGGTCGGTGGAGCTTCGACGATACAAGAAGGACCACCCATTTGCGCAATTATCCGGCTCGGATAACATTATTGCATTCACAACAAGAAGATACAGAGATCAACCTCTGATAGTTCGTGGACCAGGAGCTGGGGCACAAGTCACAGCTGGTGGAGTATTCAGTGATATTTTGCGTCTTGCATCATATCTTGGTGCTCCATCTTAG 2739 0.4184 MASFCPTTPQSLFSTSFQNTSRFPHPTFQPHHSLLSLHSSHFFRKSVGLLWGRNSPTFKIHSSLTDFTVDVAVEEKKLPKGETWSVHKFGGTCVGSSARINNVADVIINDDSERKLVVVSAMSKVTDMMYDLIHKAQSQDKSYISALDAVEEKHTLTALELFDGDDLTTFLANLHQDIRNLKAMLQAMDIAGHATESFTDLVVGHGELWSAQILSYAIKKKGIDCKWMDTREVLIVNPTSADQVDPDYLESERRLNKWYSRNPSKVIIATGFIASTHQNIPTTLKRDGSDFSAAIMGALFRARQVTIWTDVDGVYSADPRKVSDAVILKTLSYREASEMSYFGANVLHPRTISPVIRYGIPVIIRNIFNTSAPGTKVCHPSTTENEDKKILINYVKGFTTIDNLALVNVEGTGMAGVPGTASTIFRAVKEVGANVIMISQASSEHSICFAVPEKEVKAVAEALQSMFQNALYAGRLSQVAVIPNCSILAAVGQKMASTPGVSATLFNALAKANINILAIAQGCSEYNVSVVLKREDSIKALRAVHSRFYNSNTTIAMGIIGPGLIGSTLIDQLRDQAATLKEESNIDLRVMGIMGSKSMLLDDSGIDLVKWSEIREEKGEVTDLEKFVQHVHGNHFIPNTVLVDCTADSGVASHYNDWLRKGIHVITPNKKANSGPLNEYLRLRVLQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRVFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDVPVENLVPEQLASASVQDFLQNLPKFDKEISKRQEEADTAGEVLRYVGVVDVANEKGSVELRRYKKDHPFAQLSGSDNIIAFTTRRYRDQPLIVRGPGAGAQVTAGGVFSDILRLASYLGAPS* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2319 912 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 705 889 - -
Psa5g2319 912 Pfam ACT domain 413 465 IPR002912 -
Psa5g2319 912 Pfam Homoserine dehydrogenase 705 902 IPR001342 GO:0006520
Psa5g2319 912 ProSitePatterns Aspartokinase signature. 86 94 IPR018042 GO:0004072|GO:0008652
Psa5g2319 912 CDD AAK_AK-HSDH 84 378 IPR041743 -
Psa5g2319 912 SUPERFAMILY Carbamate kinase-like 85 379 IPR036393 -
Psa5g2319 912 Gene3D - 556 904 - -
Psa5g2319 912 ProSiteProfiles ACT domain profile. 409 478 IPR002912 -
Psa5g2319 912 Gene3D - 84 379 IPR036393 -
Psa5g2319 912 Pfam ACT domain 483 546 IPR027795 -
Psa5g2319 912 CDD ACT_AKi-HSDH-ThrA_2 485 550 - -
Psa5g2319 912 ProSitePatterns Homoserine dehydrogenase signature. 751 773 IPR019811 GO:0006520
Psa5g2319 912 CDD ACT_AKi-HSDH-ThrA-like_1 404 483 - -
Psa5g2319 912 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 552 727 IPR036291 -
Psa5g2319 912 Pfam Amino acid kinase family 85 366 IPR001048 -
Psa5g2319 912 Gene3D Dihydrodipicolinate Reductase; domain 2 716 886 - -
Psa5g2319 912 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 28 912 - -
Psa5g2319 912 Coils Coil 171 191 - -
Psa5g2319 912 Gene3D - 392 552 - -
Psa5g2319 912 ProSiteProfiles ACT domain profile. 490 567 IPR002912 -
Psa5g2319 912 PANTHER - 28 912 IPR011147 GO:0004072|GO:0004412|GO:0009067
Psa5g2319 912 Pfam Homoserine dehydrogenase, NAD binding domain 561 697 IPR005106 GO:0016491|GO:0050661
Psa5g2319 912 SUPERFAMILY ACT-like 394 468 IPR045865 -
Psa5g2319 912 SUPERFAMILY ACT-like 476 564 IPR045865 -
Psa5g2319 912 TIGRFAM asp_kinases: aspartate kinase 84 549 IPR001341 GO:0004072|GO:0008652
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2319 Psa-Chr5 179827003 179834814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2319 K12524 - gmx:100812202 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2319 5 179827003 179834814 Psa5g2319 5 179827003 179834814 ECH