Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2307 ATGGAAGATGAGGGTAGTTTGATGATGTTTCCAATGGAGAAGAGAGCTTTGGAGTGTGTTGGTAAAGGTTTTGATCTAACAAGTGATTTTCGAATGAAATTCGCAAAGGGATTGATAAATGGTGGAAGGTTAGTGGTGGTTGATGAAGTAAACAAGAGAGATGTTATGGTTCCTGGTGGAGTTATCATTCCTGATGTTTCCGAGGATATTCGATTCGACAAAGGCGATCGTGTTCGGTTCAAATCAGATGTTCTTCCATTCAATCAGATGTCTGAAATGCTTAACCAGAAATCAGCCATACAAGGAAAAATTCCTTCGGGCTATTTCAACGCGGTGTTTGATTTAAGTGGCGACTGGTTTCGCGACGCGCAAGAGATTAAATCTCTTGCTTTTGATGGTTACTTCATTTCTCTTTACTATTTGCACTTGACTGCTTCACACATGAAACTTCAAGAGGAAGTTAAAAAGTCTGTTCCAGCACAGTGGGATCCAGCTTCTTTGTCCAGGTTTATTGTGACATATGGTACACACATAATAGTAGGCATGGCTGTTGGAGGACAAGATGTAATATGTGTCAAACAAAAACATTCTTCAAAGGTTCCTCCTAGTGATCTCAGAAGACATTTAGAGGACTTGGGAGATTTTCTATTTTCAGATTTAAGAAGCCCTTCTCTACTCGAGAGGAAGACAAGATTAGAAGACAAACAAAAAGTTCCAGAAGTTTTTAACCGAGTGATGCAATCGAGCACGACGCAGTTCACAAGTATTTCGGAAACATCAAGCAAAGATGGCCTCACTATTATTTGCTCGAAAAGAGGAGGAGATGTGTTTAAGCACAGTCACTCAAGTTGGCTCCAAACAATGGCTTCTAGTCCTGAAGCAATCCATTTCAAGTTTGTTCCTATTTCGTCGCTTCTCACCGGAATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTATATTTAAGATATAAGCCCTCTCAGGAGGACTTACAATATTTCTTGGAGTTTCAAATTCCCAGAGAATGGGCACCCATGTTTTCTGAGCTTCCTCTGAGGCATCAAAGGAAAAAACCTCATTCTCCTCCCCTGCAATTTAGTTTCATGTCTCCAAAGCTTCACATAAACTCTACACAGGTAGTAAGTGAACGGAAACCTGTGGTTGGTCTCCGATTATACTTGGAGGGAAGGAAATGTGATAAACTTGCAATACATATACATCATCTTTCAAGCCTCCCAAATACAATGACCATCTCTTCAACCACGACCACGACTATGTGGCGAGGATCTGACAACGATGAATCCAGTGACCAATTCGCGGAACCAATAAGATGCAAGAGATTCGCGCACGTGTGCACCTCAGTGGTTAAGTATGACCCTAACTGGTTGCACGAATCGAATTCAACCTCAACCGGTGTTTATATCGTGACCGGTGCTCAGCTCATTAGCAAAGGAAGTTGGCCGAAGAATATGCTTCATTTGCGACTTCTCTTCACTCACATACCAAATTGCAGCATCAGGAAAACCGAATGGGCTGCTGCACCAGAAGCTTCTAGAAAATCGTCTTTCTTCACGAATCTGAGCACAACATTTTCATTCACACAACAAAGTGTTACTGCTACACAGAAACAGGCTGCTCCAACTGCCCTTAACTCTGGTGTTTATCCGGATGGTCCGCCCGTGCCCGTTCGTTCCGCTAAAATGCTTAAATACGTGGAGACGGGCGAGGTTATGCGTGGCCCGCACGATGCGCCCGGGCATTGGTTGGTAATTGCTGCTAAGCTTGTGACAGAAGGTGGTAAAATAGGATTACAGGTAAAGTTTGCATTGTTAGATTACTAG 1845 0.4266 MEDEGSLMMFPMEKRALECVGKGFDLTSDFRMKFAKGLINGGRLVVVDEVNKRDVMVPGGVIIPDVSEDIRFDKGDRVRFKSDVLPFNQMSEMLNQKSAIQGKIPSGYFNAVFDLSGDWFRDAQEIKSLAFDGYFISLYYLHLTASHMKLQEEVKKSVPAQWDPASLSRFIVTYGTHIIVGMAVGGQDVICVKQKHSSKVPPSDLRRHLEDLGDFLFSDLRSPSLLERKTRLEDKQKVPEVFNRVMQSSTTQFTSISETSSKDGLTIICSKRGGDVFKHSHSSWLQTMASSPEAIHFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSQEDLQYFLEFQIPREWAPMFSELPLRHQRKKPHSPPLQFSFMSPKLHINSTQVVSERKPVVGLRLYLEGRKCDKLAIHIHHLSSLPNTMTISSTTTTTMWRGSDNDESSDQFAEPIRCKRFAHVCTSVVKYDPNWLHESNSTSTGVYIVTGAQLISKGSWPKNMLHLRLLFTHIPNCSIRKTEWAAAPEASRKSSFFTNLSTTFSFTQQSVTATQKQAAPTALNSGVYPDGPPVPVRSAKMLKYVETGEVMRGPHDAPGHWLVIAAKLVTEGGKIGLQVKFALLDY* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2307 614 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 3 336 IPR020864 -
Psa5g2307 614 PANTHER OS02G0475300 PROTEIN 11 614 - -
Psa5g2307 614 Pfam MAC/Perforin domain 109 322 IPR020864 -
Psa5g2307 614 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 11 614 IPR044663 GO:0006952|GO:0012501|GO:2000031
Psa5g2307 614 SMART MACPF_8 126 324 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2307 Psa-Chr5 178722906 178725395 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2307 - - gmx:100781070 953.74