Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2269 ATGGCAGCTGGAAAGTCTCACAGTTTCAGGATGCAGGAGCCTCTAAAGCCTCCACCCACTAAGAAGCCTCGAAGAGATCGAAGCAGGGGAAAGTCATCAGGAAGATCCTGTACAAGTGAAGTTATGGAACAAGAAATCTGGAAAGATTTTCCTGAAGATTTATTTGAGGCGGTAATTGCACGACTTCCCATTGCCACTTTTTTCCGCTTCCGTTCTGTATGCCGTCGATGGAGCTCTTTGCTGGCTTCTCAAAGCTTTTCTCAGCATTGTGCCCAAGTCCCACAGGAAAATCCATGGTTTTACACCATAACCCATGAAAATGTGAATTCGGGAGCCATGTATGACCCTTCTTTGAAAAAGTGGCACCATCCTTCTATATCAGCAATGCCCACAAAGTTGATTGTTTTGCCAGTGGCTTCTGCAGGTGGGTTAGTTTGCTTTTTGGACATTGGCCATCGAAACTTCTATGTATGTAACCCGCTGACTCAATCCTTCAAGGAGTTGCCAGCTCGGTCAGTGAGGGTCTGGTCTCGCGTTGCTGTAGGGATGATAGCGAATGGAAATTCTGCTGGTTCAGGCTACAAGATCCTATGGGTGGGTTGTGATGGAGAATATGAAGTTTATGACTCGATGAAAAACTCTTGGAGCCGTCCAGGAAACATGCCTGGAAGTATGATGCTGCCACTGGCCCTTAACTTTAGGTCACAAGCTGTCTCTATCGACAGTACACTTTACTTCATGCGTTCAGATCCAGAAGGGGTTGTTTCTTATGATATGGCAACGGGAGTGTGGAAACAATACATAATCCCAGTGCCATTGCATCTGACTGACCACACTCTGGCTGAGTACGATGGCCAGATCATGCTTGCAGGATTGCTCACAAAGAATGCAGCCACGTGCGTATGCATATGGGAGCTGCAGAAAATGACGCTCTTGTGGAAGGAGGTAGACAGAATGCCAAATATATGGTGCTTGGACTTTTATGGTAAGCACGTTAGAATGACTTGCCTGGGTAACAAAGGCTTGCTCATGTTGTCACTGAGATCAAAACAAATGAATCGGTTGGTTACTTACAACATAGCAAAGAAGGAATGGCTGAAGGTTCCCGGGTGTGTGGTGCCGCACGGGAGGAAACGACAGTGGATAGCATGTGGTACTGCATTTCATCCATGCCTGACTGCCGTGGCTTGA 1191 0.4685 MAAGKSHSFRMQEPLKPPPTKKPRRDRSRGKSSGRSCTSEVMEQEIWKDFPEDLFEAVIARLPIATFFRFRSVCRRWSSLLASQSFSQHCAQVPQENPWFYTITHENVNSGAMYDPSLKKWHHPSISAMPTKLIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVRVWSRVAVGMIANGNSAGSGYKILWVGCDGEYEVYDSMKNSWSRPGNMPGSMMLPLALNFRSQAVSIDSTLYFMRSDPEGVVSYDMATGVWKQYIIPVPLHLTDHTLAEYDGQIMLAGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGCVVPHGRKRQWIACGTAFHPCLTAVA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2269 396 PANTHER F-BOX/KELCH-REPEAT PROTEIN 1 395 - -
Psa5g2269 396 SUPERFAMILY F-box domain 42 122 IPR036047 GO:0005515
Psa5g2269 396 SMART fbox_2 50 90 IPR001810 GO:0005515
Psa5g2269 396 MobiDBLite consensus disorder prediction 1 38 - -
Psa5g2269 396 PANTHER BNAA07G08860D PROTEIN 1 395 - -
Psa5g2269 396 Pfam F-box domain 47 85 IPR001810 GO:0005515
Psa5g2269 396 Gene3D - 99 382 IPR015915 GO:0005515
Psa5g2269 396 SUPERFAMILY Galactose oxidase, central domain 111 376 IPR011043 -
Psa5g2269 396 ProSiteProfiles F-box domain profile. 44 89 IPR001810 GO:0005515
Psa5g2269 396 Gene3D - 47 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2269 Psa-Chr5 176900704 176905665 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2269 - - gmx:100795488 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2269 5 176900704 176905665 Psa5g2269 5 176900704 176905665 ECH