Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2256 ATGTACCAATCGGAGAATAACCGTGAAGATTCGGAGCGAACGGCTTTCCGACGAACAGAGAAGAAGTACAAGCTCTACTACGATAACAATGCTTCTTCCAAGAACAAAAAGAATAAACAACCCAAACCGGTGGACTTAACGGAGGTTCTTGACTTCAGATCAATTCTAGAGTGCCATCACCGCAACCTTGAGCTTCCTCAAGGTGTTGTTGTCCTTCAGGACAAATTCAGTTCTCCAGTGTTCTCTTTGCAAAATCACCCTGGCTTTTATTTTATCCCTGGGGCATTAAGCATAGAGAAACAATGCGATTTGGTAAGGGAGAGTTTAACTGAATTTCCGCAGCCACCTAACAGAACAAATCACAATGCTATATATGGTCCTATACACAATTTATTTGTTGCGGCTAAAGAAGGGAAAATTTTGGTTGAAGAGAAATCTCCAATTACTTCGCATGAATGTAGTTCTGATTTCGACTGTAGGGATGGTGAGGAGTGGAAGTTTTTCACAGAAAAGGAAGCGTCCTTGAGAAAATGCAAATCCGTTTCTGGTTCTTCTTTGCTGCGAAAGTTGCGATGGAGCACCCTTGGCCTACAGTTTGATTGGTCTAATCGAAATTATAATGTGTCTCTCCAACATAACAAAATCCCTGAAGCACTCTGTGAGCTTGCCAAACAATTGGCAAAACCTGCATTACCTGCTGGTGTTGAATTCCAGCCTGAAGCTGCGATAGTAAATTACTTTGCATCAGGGGACACACTGGGTGGCCACCTTGATGATATGGAAGCAGATTGGAGTAAGCCCATAGTTAGTTTAAGCTTGGGCTGTAAAGCCATTTTTCTATTGGGAGGAAAATCTAGAGAGGATGCTCCCCTGGCGATGTTTCTTCGGAGTGGAGATGTTGTACTGATGGCTGGAGAAGCAAGGGAATGCTTTCATGGTGTTCCTCGGATCTTCACCGACAAAGAAAATGCTGAGATAGGCCATCTTGAGACACAGTTGACGCAAGAAGATGATCTCTGTTTCCTAAATTATATTCAAACTTCAAGAATCAACATCAATATCAGACAAGTTTTTTAA 1077 0.4225 MYQSENNREDSERTAFRRTEKKYKLYYDNNASSKNKKNKQPKPVDLTEVLDFRSILECHHRNLELPQGVVVLQDKFSSPVFSLQNHPGFYFIPGALSIEKQCDLVRESLTEFPQPPNRTNHNAIYGPIHNLFVAAKEGKILVEEKSPITSHECSSDFDCRDGEEWKFFTEKEASLRKCKSVSGSSLLRKLRWSTLGLQFDWSNRNYNVSLQHNKIPEALCELAKQLAKPALPAGVEFQPEAAIVNYFASGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDAPLAMFLRSGDVVLMAGEARECFHGVPRIFTDKENAEIGHLETQLTQEDDLCFLNYIQTSRININIRQVF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2256 358 PANTHER ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB 1 358 - -
Psa5g2256 358 Pfam 2OG-Fe(II) oxygenase superfamily 154 355 IPR027450 -
Psa5g2256 358 Gene3D - 160 357 IPR037151 -
Psa5g2256 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 358 IPR005123 -
Psa5g2256 358 SUPERFAMILY Clavaminate synthase-like 87 357 - -
Psa5g2256 358 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 1 358 IPR004574 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2256 K10765 - gmx:100797068 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2256 5 176076449 176080652 Psa5g2256 5 176076449 176080652 ECH