Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2253 ATGGTTGTTGCTCAGAAACTCAAGGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTGACAAGGAACCTGCTCCGAATTGCCATATTCAACATCAGTTATATCAGAGGACTATTTCCTGAGAAGTACTTCAATGACAAGTCTGTTCCGGCTTTAGAGATGAAGATCAAAAAGCTTTTGCCAGTGGATGCTGAGTCTCGTAGACTGATTGATTGGATGGAGAAAGGTGTTTATGATGCTTTACAGAAGAAATACCTGAAGACACTTTTATTCTGCGTGTGCGAAGCAGTTGATGGACCGATGATTGAGGAATATGCATTTTCCTTTAGCTATTCGGATTCTGACAAGCAGGAGGTTTCCATGAATATCAACCGCACTGGAAGCAAGAAGCAGGGGGGAGCCTTCAAGTGTAACTCGACTACAGACATTACTCCCCAGCAGATGAGGAGTTCTGCTTGTAAAATGATAAGAACTCTTGTTCAGTTGATGAGAACTCTAGAGAAAATGCCTGAAGAGCGTACCATTCTGATGAAGCTCCTCTACTATGATGAAGTGACGCCAACGGATTATGAGCCTCCTTTCTTCAGGGAATGCACAGAAGAAGAAGCGAATCATCCTTGGGTGAAAAATCCATTGAAAATGGAGGTCGGAAATGTAAACAGCAAGCATTTTGTCTTAGCTCTGAAGGTGAAGAGTGTGCTTGACCCTTGTGAGGATGACAATGAGGTTATCCAAGATGATATGAGTGATGATTCCATGCAAAATAATGAGTATTATGATACTGACAGTGAGGTTGCTCATTCTCAAGGGAATCAATATATAGTTGCACCCATAGAGAAACAGCAAGCACAGGAAGATACTAGCGAGATTGATGAAGAGAATACCCAGGACCCTGTTGAAGATGAGCAACAATTGGTTCGGGTCAAGGAGTGGCTCAACTGTTGTCACTTGGATACCATTGATCTTACTGACGTTCTATCAAATTTTCCAGACATCTCAGTGGTTCTGATTGAAGAGATCATGGACAACCTTGTCAAGGAAGGCGTGCTATCGAAAAAAGGGAACGACACCTATGCTATTATTAATAAGGACAAGAAATCTGAATTTGAATTCACCGATGTGAAAGAAGAAACTGATGGTCAAATTCCTCCGGTCCCTGATAGAGCTTTGCAGGGCGAAGATCTCATATACATGAAGGCTCTCTACTATACTCTTCCACTGGCTTATGTGTCGGCCACAAAGCTTCAAAGCTCCTTCCAGGGAGAAGTAAACCAAACAGCAGCAAGAAAGATAATTGATAAAATGACCCGGGATGGGTTTCTTGAACCTAAAGGCAACAAAAGACTAGGAAAACGTGTGATCCATTCTGAGTTAACCCAGAGAAAATTCATCGAGGTCCAAAAAGCTTTGGGTGTTGCTGAAGCTATGGATGTTGATGACTGTGAACCAAATAGCAAGTCCAAACAAACTGGTTACCGTGTAGATGGAAGCAACCGAGACATCTCAACATGTGGTGTTCTCCACTCAATTGGATCAGATTTAACACGAATGAAAGTGACATCTGATACAGATAATACGGACTCCATGAGTGGACCAAACATGCCAAAGGCAAAAGAGCCAGGAAGCTCCCCAATAAGCAGGGCTGGGCCAGTTGCTTCAAGAGAGAGTTTTGCGCACAGGAAAGAGATCAGCACAGCAAATGCAAGTGGAATTGCACACGAAGGCGACGCAGCTGATACAATTATCTGCAGTAAATCGTCCCAGGACAAGCGCCCCAGGAAGACAAGCGCTGTCAAGGAACCTATCCATCAAAATATGAAGCGTCAGAAATCGCAGGCTACATGA 1845 0.4336 MVVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLLPVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSDSDKQEVSMNINRTGSKKQGGAFKCNSTTDITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDEVTPTDYEPPFFRECTEEEANHPWVKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEVIQDDMSDDSMQNNEYYDTDSEVAHSQGNQYIVAPIEKQQAQEDTSEIDEENTQDPVEDEQQLVRVKEWLNCCHLDTIDLTDVLSNFPDISVVLIEEIMDNLVKEGVLSKKGNDTYAIINKDKKSEFEFTDVKEETDGQIPPVPDRALQGEDLIYMKALYYTLPLAYVSATKLQSSFQGEVNQTAARKIIDKMTRDGFLEPKGNKRLGKRVIHSELTQRKFIEVQKALGVAEAMDVDDCEPNSKSKQTGYRVDGSNRDISTCGVLHSIGSDLTRMKVTSDTDNTDSMSGPNMPKAKEPGSSPISRAGPVASRESFAHRKEISTANASGIAHEGDAADTIICSKSSQDKRPRKTSAVKEPIHQNMKRQKSQAT* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2253 614 MobiDBLite consensus disorder prediction 280 299 - -
Psa5g2253 614 SUPERFAMILY The spindle assembly checkpoint protein mad2 11 237 IPR036570 -
Psa5g2253 614 Pfam HORMA domain 17 223 IPR003511 -
Psa5g2253 614 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 6 601 - -
Psa5g2253 614 MobiDBLite consensus disorder prediction 515 614 - -
Psa5g2253 614 Gene3D HORMA domain 5 285 IPR036570 -
Psa5g2253 614 MobiDBLite consensus disorder prediction 586 606 - -
Psa5g2253 614 MobiDBLite consensus disorder prediction 515 532 - -
Psa5g2253 614 ProSiteProfiles HORMA domain profile. 15 230 IPR003511 -
Psa5g2253 614 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 6 601 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2253 K12778 - gmx:100792473 986.097