Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2252 ATGGAAACCTACGAGGTAAAAGTGAAGGCTGAGAACAAGAACAAAGAACTAAAGCGCCTAGGGTTTGTGAAGGTCGCTGCTATTCACACTTACGTGTTTGTCTCGTATCTGTATGAATCTGCAAAGAAGAATTCAGGGTCTTTGAGATCTGCTGTTGAAACGGTGGAGGGAACAGTAACCACTGTTATTGGTCCTGTCTACAACAAATTCAAGGATGTCCCTGATGATGTCCTGGTTTTTGTCGACAACAAGGTGGATGAAGCCACTCACAAGTTCAACGAACATGCTCCTACTATTGCTAAGCAGCTTGCGGACAAAACCAAAACTTTGATTCAGAAAGTGACATATGAAGCGGGGAAAGCTGTGAATGTGGCTCAATCTGAAGGACCACGAGTAGCTGTAGAATATGTCGTTACAGAATCCAAGAATTTGCTGCTAATCAATTCAGTGAAGCTGTGGGCTGGACTCAACCAATTTCCACCTTTCCATGCAGTTGCAGAAATGGCGGTTCCCACCGCGGCTCACTGGTCTGAGAAATACAACCATGTAATCAAGACCATGGCTGAAAAGGGCTATAAGTTTGTTGGTTATTTGCCTTTGATACCTGTTGATGCTATATCTAAGGCATTTAAGCAGGGGAAAGTTAACTTGAAAGGAGATGGAGTGGTTTCAGTGGAAAAGAAATTAGAATAA 693 0.43 METYEVKVKAENKNKELKRLGFVKVAAIHTYVFVSYLYESAKKNSGSLRSAVETVEGTVTTVIGPVYNKFKDVPDDVLVFVDNKVDEATHKFNEHAPTIAKQLADKTKTLIQKVTYEAGKAVNVAQSEGPRVAVEYVVTESKNLLLINSVKLWAGLNQFPPFHAVAEMAVPTAAHWSEKYNHVIKTMAEKGYKFVGYLPLIPVDAISKAFKQGKVNLKGDGVVSVEKKLE* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2252 230 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Psa5g2252 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 228 IPR008802 -
Psa5g2252 230 PANTHER RUBBER ELONGATION FACTOR-RELATED 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2252 Psa-Chr5 175684453 175686658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2252 - - mtr:MTR_3g085370 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2252 5 175684453 175686658 Psa5g2252 5 175684453 175686658 ECH