Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2233 ATGGGTTCATTCCAGACACCGATAGGAATGAGAAGCTCCGCATTGCTAGAAACCTCGTGCGGATTCCTGTTACAGGAGCTGCAGATAATTTGGGAGGAAATTGGAGAAGACAAGTTCGAGAGGGAAAAGGTTCTACTGGATATGGAGCAAGAGTGCCTTGAGGTTTACAGGAAAAAAGTTGACAGAGCAAATACATCTAGAGCTAGTCTGCATCAGGAGTTGGCTGAAGCTGAGGCGGAATTTACTCACCTTCTTTTGTCCCTTGGCGAACGATCTCTTCCTGGACGGCCAGAAAAAAGGGCGGGTACGCTAAAAGAGCAGCTAGATTCGATAACTCCAGCACTCCGTGAGATGCGCTTGAGGAAAGAAGAGAGATTAAACCAATTCCGAGTTGTGCAAGGACAAATTCAAAGAATTTCTGCAGAAATTGCAGGTAACTCAGACGATGCACTCTTAACCATTGCAGTGAATGAGAATGATCTTTCACTAAAAAGACTTGAGGATTATCAGAATGAGCTGCAAAGGCTCTACAATGAGAAGAATGAAAGACTCCAGCAAGTGGAGAAATACATAGACAAAATACATAGCTTGTCAACAATCTTGGGAAAGGATTCATCTGCAATCATCTTGCAAGTTCACCCCAGCTTGAATGATTTGTGTGGCATAACAAAAAATATAAGTGATGCTATCCTACATAAACTCAATATCACGGTGGAGTCCCTTTATGAAGAAAAGCAAAATCGTCTTGACAAGCTTCACCATTTAGGCAAAGCACTATCAAATCTTTGGAATCTTATGGATACACCTTACCGTGATAGACAACCTTTTTCCCATGTAGTCAATTTGTTGTCAGTCTCATCGGCGGAAGTATCAGATCCAGGAAGTCTTACTCTAGAGATAGTCCAGCAGACTGAAGCTGAAGTAATAAGACTAGATCAACAAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAGCAGGAGGAACTGGAGTTCATATGCAAGAAATCACACGTGGAGATTCCTTCACGGACAGAAATGAACAATATAATTAGCCTCATAAACTCAGGGGAGATTGACCATTCCGATCTCCTCATGAGCATGGATGAACAGATCTCCAGAGCAAAAGCAGAGGCTTCCAGTAGGAAGGCTATAATGGAAAAAGTTGAGAAGTGGATGCTAGCACGTGATGAGGAGCGCTGGCTAGAAGAATACAGCATGGATGAGAGACGATATTCAGTCAGTAGAGGAGCTCATAAAAACTTGAAACGAGCTGAACGCGCCCGTATAATGGTCAGTAGAATGCCAGCTCTGGTAGATTTGCTTATAAAAATGACTAGGAGTTGGGAAGCAGAAAGAAATAAAATTTTCTTGTATGATCAGGTTCCTCTAATGGAAATATTGGAAGAATACAACATTCTAAGGCAAGAAAAGGAGGAGGATAAGAAAAGACAACAGTCGTGGGAAAAGAAGAAGGTCCAGAGCCAAGTAGTTTTTGAGCGAGATAATACATATGCGTCAAGACCAGGCACCAGCACGAGACGTGTTCCAAATAGAAGCTTGAACGGGAGTCCAGAATGTTCAGCAACCATGAACAAAAGGCTCCCAATGAGTATCCAACAACTAGGATCAAACAACATATATTCAGGAAATCAAGGTATATCCTTCATTAAGGATGGAAGGAAGATACAAAGGAAAAAGATTTTTGGTGAACCTGTCTTTACTTCTCATATGAGAGACGACGCATCTTCAATGGTGCTCACACATTACGGACCATTTTCTCCTTAA 1788 0.4195 MGSFQTPIGMRSSALLETSCGFLLQELQIIWEEIGEDKFEREKVLLDMEQECLEVYRKKVDRANTSRASLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGTLKEQLDSITPALREMRLRKEERLNQFRVVQGQIQRISAEIAGNSDDALLTIAVNENDLSLKRLEDYQNELQRLYNEKNERLQQVEKYIDKIHSLSTILGKDSSAIILQVHPSLNDLCGITKNISDAILHKLNITVESLYEEKQNRLDKLHHLGKALSNLWNLMDTPYRDRQPFSHVVNLLSVSSAEVSDPGSLTLEIVQQTEAEVIRLDQQKASKMKELFQKKQEELEFICKKSHVEIPSRTEMNNIISLINSGEIDHSDLLMSMDEQISRAKAEASSRKAIMEKVEKWMLARDEERWLEEYSMDERRYSVSRGAHKNLKRAERARIMVSRMPALVDLLIKMTRSWEAERNKIFLYDQVPLMEILEEYNILRQEKEEDKKRQQSWEKKKVQSQVVFERDNTYASRPGTSTRRVPNRSLNGSPECSATMNKRLPMSIQQLGSNNIYSGNQGISFIKDGRKIQRKKIFGEPVFTSHMRDDASSMVLTHYGPFSP* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2233 595 Gene3D - 372 507 - -
Psa5g2233 595 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 520 - -
Psa5g2233 595 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 8 8 595 - -
Psa5g2233 595 Coils Coil 464 491 - -
Psa5g2233 595 Coils Coil 301 321 - -
Psa5g2233 595 Coils Coil 60 80 - -
Psa5g2233 595 MobiDBLite consensus disorder prediction 502 522 - -
Psa5g2233 595 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 595 IPR007145 GO:0000226|GO:0008017
Psa5g2233 595 Coils Coil 159 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2233 Psa-Chr5 174471889 174475522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2233 12 530 EF-hand Containing Proteins AT5G62250 36.723 2.55e-92 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2233 K16732 - gmx:100791080 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2233 5 174471889 174475522 Psa5g2233 5 174471889 174475522 ECH