Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2232 ATGAAACGCACTTTGTTAGGAGGATCAGTTTCATCGCGTTTCATGATTTCTTCTACTTCAGATGATACAGCATATGGCTCCCCTCATTGGATTGGTAAAGGACTGACCTGTGTTTGTTTCAAGCCTAAGGGAAACTGCCAACCCGTCTGCATTAATTTGACCCCTTTACAGGAGGAAAGGCTTAGAAGATTGAAACGCAGAATGAAAGTTTACTTTGATGCTTCCAAGCTTGATCACCAGGATGCTTTGAGAGCTCTTTGGTCTGCTTCATTCCCTGGTCATGAGCTCAGAGGTTTGGTTTCTGATCAATGGAAGGAAATGGGGTGGCAAGGAAGAGATCCTTCTACTGATTTCAGAGGAGCTGGTTTTATATCCTTGGAGAACCTCCTATTCTTTGCTAAGACATTCTCCACTTCTTTTCAGAATCTTTTGATGAAGCAAGGAAGAAAGGGAGTTGTTTTCGAGTATCCCTTTGCTGTTGCTGGTGTAAATATTACTTTCATGATTATGCAAATGTTAGACCTCGATGCAGCAACCAAACCCAGGACTTTCATTAGAACAGTTTTTCTACAAATGCTTTCGGAAAATGAATGGGCATTTGATTTGCTTTATTGCGTTGCATTTGTGGTCATGGACAAACAGTGGTTGGAGACAAACGCTACGTACATGCAATTTAATGATATCTTGAAATCAACGCGAGTTCAGCTGGAGAAAGAGTTGATGATTGATGATGTTCTACGGATTGAAGACATGCCTTCTTATAGTCTTCTTTCTTGA 777 0.4093 MKRTLLGGSVSSRFMISSTSDDTAYGSPHWIGKGLTCVCFKPKGNCQPVCINLTPLQEERLRRLKRRMKVYFDASKLDHQDALRALWSASFPGHELRGLVSDQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSTSFQNLLMKQGRKGVVFEYPFAVAGVNITFMIMQMLDLDAATKPRTFIRTVFLQMLSENEWAFDLLYCVAFVVMDKQWLETNATYMQFNDILKSTRVQLEKELMIDDVLRIEDMPSYSLLS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2232 258 ProSiteProfiles ELMO domain profile. 78 240 IPR006816 -
Psa5g2232 258 PANTHER ELMO/CED-12 FAMILY PROTEIN 12 257 - -
Psa5g2232 258 Pfam ELMO/CED-12 family 63 229 IPR006816 -
Psa5g2232 258 PANTHER ENGULFMENT AND CELL MOTILITY 12 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2232 Psa-Chr5 174466297 174469330 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2232 K23538 - gmx:100794586 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2232 5 174466297 174469330 Psa5g2232 5 174466297 174469330 ECH