Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2218 ATGTTCGGAGCTCAATCTTCTCCTTCTCCCTTCGGAACCCCTTCTACAACACCGGCATTTGGTACCCCAAATTTCGGTACCCCATCTTCCACTCCAGGTTTCAGTACCCCAGGTTTCGGAACCCCTTCTTCAACCCCTGCTTTTGGGGCTTCTTCTACTCCTGCTTTCGGTGGTTCTTCCCTTTTCTCCTCACCATTCTCTTCTCAACAGCAACAGCAACCACAGCAGCAGCAGCAACAAACTTCACTCTTTCAACAATCACCTTCTACCGGTTTCGGATTTCAGAATTCTCTGCAAGCGCCTCAAGCTACGCCATTCCCAAATTCTCAATTGACTACTCAAATGGCTAACGTGGCTCCAGTTCCATTCTCTCTAGCTGATCGTGATATTCAAGCAATCCTTGATGCTTATAAGGAAGATCCTGGAAACCCGAAGTATGCTTTTAAGCATTTGTTATTCAGTGTAACAGACCCACAGTTTAGGGGGAAACCTGCTGGTGTTTCGGATATCATGTGGGCGGAAGCTATGGGGAAGCTTGAGGGTATGGAAAGTGCCGATAGAGAACGTCTATGGCCACAGCAAGTTCAAGGTTTTAAGGATCTTTCCCAACGTCTTAAGCTCCAAGATGAAGTCATTGTCTCTGATGCAGAGAGACTGAGTGTAACCCAAAGCAATGTTAAAATGCTCCAAAGACATTTTCAAGCTGATACTCTTCCTTGGATTCAAAGACTGAAACAGAAAGAACAGATTCTTCAGCAGCGCATATTAAGAGTGATGAGAGTAGTGGAAGCATTGGAAGGAAAAGGCTGCCGTATTCCCTTAACAAAAGGGGAAGCTGAACTCGCAGAGAAATTAGCCACAATAACTAGACAGTTGAAAGGATCTGGAGCAGAATTATCTAGAAGGGTACAAAATCTACTCGGTGTATCCCGTGTCAAGGCTAATAGCAATGAATTTGGTAACTCCACTTATCTTCCAGGCTCAACCAAAATTCATGAACAGAGTCTGACTGATCTGCAGGAGGTTTTACACCAGCAGATGGATGCCATAGCGAGACTTGGCAGTGTTCTAAAGCGAGATGCACGGAATATGGAGATTATGATGGCAGAGGACACAGAAACAACAGAAAATGGAAATTTAATGTAA 1146 0.4468 MFGAQSSPSPFGTPSTTPAFGTPNFGTPSSTPGFSTPGFGTPSSTPAFGASSTPAFGGSSLFSSPFSSQQQQQPQQQQQQTSLFQQSPSTGFGFQNSLQAPQATPFPNSQLTTQMANVAPVPFSLADRDIQAILDAYKEDPGNPKYAFKHLLFSVTDPQFRGKPAGVSDIMWAEAMGKLEGMESADRERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSVTQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRILRVMRVVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGAELSRRVQNLLGVSRVKANSNEFGNSTYLPGSTKIHEQSLTDLQEVLHQQMDAIARLGSVLKRDARNMEIMMAEDTETTENGNLM* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2218 381 Pfam Nucleoporin complex subunit 54 163 307 IPR025712 -
Psa5g2218 381 MobiDBLite consensus disorder prediction 1 86 - -
Psa5g2218 381 PANTHER NUCLEOPORIN P54 2 373 IPR024864 GO:0005643
Psa5g2218 381 PANTHER NUCLEOPORIN P54 2 373 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2218 K14308 - gmx:100797030 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2218 5 174034405 174039898 Psa5g2218 5 174034405 174039898 ECH