Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2215 ATGTGGGCAGTTCTGCGAGCTCGTGCTTGTTCCTCGCGCTATGCATCAAATCCACAGCCTCTTCTTCAACCATGGAAGCTAGGGTTTTCCTCTCTATCCACTACCGTCAACACTGACGGTGGCGTCAGTAAATGCTTCTTAGATCTGCAAGAGATCGAGAAGATTCTGACGGACGTTCAAGCTGACGACGTGAAGATAATTCCAGTTCCCAAACAGAGCGAGTGGGCGGATTTCATGGTGCTCGCCACTGGTAAATCCCCATGGCACGTCAGGAATATCGCTCAAGCCCTAATTTACCAGGCTAAGCAGAAGCAGATAGGCGCTCGGCAAATGATGCTGCCTAGCGTGCAAGGGCAAGAGGATGGAAAATGGATCGTTATTGACTCTGGTAAAGTGATAGTTCACGCACTTGATGAAAATGCTAGAGCTTACTACAATTTGGAGGGTCTTTGGACCCGCGGGACATTGCAAAATGAACCTGTTGAGGATTTACAAAAAGTTTTGGTGAAGGTCCGGCGGAAAAACAATTCCAAGAAACCTGCACAAAAGAATCCCTAA 558 0.4785 MWAVLRARACSSRYASNPQPLLQPWKLGFSSLSTTVNTDGGVSKCFLDLQEIEKILTDVQADDVKIIPVPKQSEWADFMVLATGKSPWHVRNIAQALIYQAKQKQIGARQMMLPSVQGQEDGKWIVIDSGKVIVHALDENARAYYNLEGLWTRGTLQNEPVEDLQKVLVKVRRKNNSKKPAQKNP* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2215 185 Pfam Ribosomal silencing factor during starvation 51 151 - -
Psa5g2215 185 Hamap Ribosomal silencing factor RsfS [rsfS]. 42 152 IPR004394 -
Psa5g2215 185 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 18 176 - -
Psa5g2215 185 SUPERFAMILY Nucleotidyltransferase 50 157 IPR043519 -
Psa5g2215 185 PANTHER IOJAP SUPERFAMILY ORTHOLOG 18 176 IPR004394 -
Psa5g2215 185 Gene3D Beta Polymerase, domain 2 48 166 IPR043519 -
Psa5g2215 185 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 49 151 IPR004394 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2215 - - gmx:100500386 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2215 5 173980391 173983525 Psa5g2215 5 173980391 173983525 ECH