Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2209 ATGGGTATAGATAATGAAAAATGGCAGCATGAAGAAAATTGTAATGTTGACCTCAAACAAAAGGCTATTGATGATTGGCTTCCTGTAACTGCTTCTAGAAAGGCCAAATGGTGGTATTCAGCTTTTCATAATCTAACAGCCATGGTTGGTGCTGGTGTTCTAAGTCTTCCATATGCTATGTCTAATATGGGCTGGGGACCTGGAGTTACCATTCTTATTCTATCATGGGTGATTACATTGTATACTCTATGGCAAATGGTTGAGATGCATGAAATGATACCTGGAAAAAGACTTGATAGGTATCATGAATTGGGACAAGAAGCCTTTGGAGAGAAATTGGGCCTTTGGATTGTGGTTCCACAGCAAGTTATTGTTGAAGCTGGCACATGTATTGTGTATATGGTCACTGGTGGTAAATCATTGAAGAAAATTCATGACACTCTTTGTCCTGATTGTAGAGATATCAAAACATCGTATTGGATTATTATTTTTGCTTCTGTCAACTTTGTTATTGCTCAATGCCCTAACTTCAACTCCCTTTCTATTATATCTATGAGTGCAGCAGCTATGTCTTTGACATACTCAACCATAGCATGGGCTGCTTCGGTTAAAAATGGGGTTGTGCCAAATGTGGACTATGGACCTAGATCAACTGCCACCGTTGATAAGGTATTCAACTTCCTTTCTGCATTGGGAGATGTAGCATTTGCTTATGCAGGTCACAATGTGGTTCTAGAAATCCAAGCAACTATGCCATCAACCCGTGAAGTACCTTCCAAGAAACCCATGTGGAAAGGAGTTATTTGGGCATATCTAGGAGTTGCATTCTGCTACTTCCCAGTTGCAATCATTGGATACTATATGTTTGGTAACTCTGTTGACGATAACATCCTTATCACACTAGAAAAACCTGCTTGGCTCATTGCTGCTGCTAACTTGTTCGTTGTTGTCCATGTTATTGGAGGCTATCAGGTATTTGCAATGCCGGTGTTTGACATGATTGAAACTCTCATGGTTAAGAAATTGCATTTTCCACCTTCTTTTGCACTCCGATTTTCAGTTCGCACTATATATGTTGCATTGACCATGTTCATTGGCATATGCATCCCTTTCTTCGGTTCACTTCTTGGATTTCTAGGAGGGTTCGCATTTGCCCCAACAACTTACTTTTTGCCTTGTATCATCTGGCTTAAACTCAAGAAACCCAAGAAATATGGCTTGTCTTGGACAATCAATGTGACATGCATTGTCATTGGAGTCTTATTAATGATACTATCCTCAATTGGTGCTATGAGGAATATCATCGTACAATCCGGGCACTACAAGTTCTTCTCATAA 1338 0.3984 MGIDNEKWQHEENCNVDLKQKAIDDWLPVTASRKAKWWYSAFHNLTAMVGAGVLSLPYAMSNMGWGPGVTILILSWVITLYTLWQMVEMHEMIPGKRLDRYHELGQEAFGEKLGLWIVVPQQVIVEAGTCIVYMVTGGKSLKKIHDTLCPDCRDIKTSYWIIIFASVNFVIAQCPNFNSLSIISMSAAAMSLTYSTIAWAASVKNGVVPNVDYGPRSTATVDKVFNFLSALGDVAFAYAGHNVVLEIQATMPSTREVPSKKPMWKGVIWAYLGVAFCYFPVAIIGYYMFGNSVDDNILITLEKPAWLIAAANLFVVVHVIGGYQVFAMPVFDMIETLMVKKLHFPPSFALRFSVRTIYVALTMFIGICIPFFGSLLGFLGGFAFAPTTYFLPCIIWLKLKKPKKYGLSWTINVTCIVIGVLLMILSSIGAMRNIIVQSGHYKFFS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2209 445 PANTHER OS05G0424000 PROTEIN-RELATED 15 440 - -
Psa5g2209 445 Gene3D Amino acid/polyamine transporter I 30 439 - -
Psa5g2209 445 Pfam Transmembrane amino acid transporter protein 34 430 IPR013057 -
Psa5g2209 445 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 15 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2209 Psa-Chr5 173816237 173818375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2209 19 445 Organic Solute Cotransporters AT1G24400 75.410 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2209 - - gmx:100786115 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2209 5 173816237 173818375 Psa5g2209 5 173816237 173818375 ECH