Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2199 ATGTTCAAAAAGGTATTCGGTAAAATCCCTAAAAAGTCCTCAAAAGGTTCTGAGAATCGTGACCAAGGTGGAAACTCTAGAAGCCATGGTGTTGTAGCATCTAAAAACAGTGATAATGTTACCCTACCAGGGAGTAGCAAAACCGGTAATGTTTCTTCTTCTTCTTCCTCCTCTTTGAATGTAGGACAAGGACAGTATCATAATAATCATGGTAATAAATCTTCCTTACCTCTAAATGAGAATTCCAATGGTAATTTCAATTCTTATGAAGCGTTGCCAGCGTTTAGGGATGTTCACAATTCTGAGAAACCGAGTTTGTTTATAAAAAAACTTAGGATGTGTAGTGTTGTTTTTGACTTCACTGACCCTACTAAACACCTCAAAGAGAAAGAGGTTAAGAGACAGACTTTGGTGGAGCTTGTTGATTATGTGTCTTCTGTTAATGCTAAATTCAGTGAGACTGTTATGCAAGAGGTTGTGAAGACGGTGTCTGTAAATATATTCAGAACGCTTAGTCCTCAGCCGCGGGAGAACAAACTCATTGATGGCGTTGAGTTGGAGGAGGAGGAGCCTTCGATGGATCCTTCTTGGCCTCATTTGCAAATTGTGTATGAGCTTTTTCTTAGGTTTGTTGCATCGCCTGAGCTGGATGCGAAGTTGGCTAAGAGATTTATTGATCAGTCTTTCATTTTGAGGCTGCTTGATTTGTTTGACTCGGAAGATCCTAGAGAGAGGGAATACTTGAAAATGTCCTTGCATCGTATCTATGGCAAGTTAATGGCGCATCGTCCTTTCATTAGGAAATCGATCAATAACACCTTTTTGAATTTTGTTTTTGAGACTGAGAAGCATAATGGCATTGCTGAGTTCTTGGAAATTCTAGGGAGCATCATTAATGGTTTTGCGTTGCCTTTGAAAGAAGAGCATAAATTGTTTCTGGTTCGGATATTGATTCCGTTGCACAAACCAAAGTGCTTAGCAATGTATCATCAGCAGTTATCTTATTGTGTTACTCAATTTGTGGAGAAAGATTGCAAGCTTGCGGATACAATCATTAGGGGCTTATTGAAGTATTGGCCAATAACAAATAGCTCAAAGGAAGTCATGTTCCTAGGTGAGTTGGAAGAAGTCTTGGAAGCAACACAACCTCCGGAGTTCCAGCGATGTATGGTGCTGTTGTTTCGCCGTGTTGCTCATTGTTTGAATAGCCCCCATTTTCAGGTGGCGGAAAGAGCTCTATTCTTGTGGAATAATGACCATATTGTGAACTTAATCAAACAAAACTGCAAAGTGATACTTCCCATCATCTTTCCTGCATTGGAGAAAAATACTAAAACTCATTGGAATCAAGCTGTCCATAGTTTGACTTTAAATGTTAAGAAGATTTTTCAGGATCTGGATCCCGATCTGTATAAAGAATGCTTACAAAAGTTTGAGCAAGACTTGTCGAAGGAAGGTGAAGTGACAGCAGGACGCGAAGCTACGTGGAAACGTTTGGAGGAGGTTGCCGCAAAGAAGGCTGCAGGTAACGAAGCCGTGCTTATTAGTAAAACGCTCCCTCGCAAATCTGCCAGTTAG 1578 0.4043 MFKKVFGKIPKKSSKGSENRDQGGNSRSHGVVASKNSDNVTLPGSSKTGNVSSSSSSSLNVGQGQYHNNHGNKSSLPLNENSNGNFNSYEALPAFRDVHNSEKPSLFIKKLRMCSVVFDFTDPTKHLKEKEVKRQTLVELVDYVSSVNAKFSETVMQEVVKTVSVNIFRTLSPQPRENKLIDGVELEEEEPSMDPSWPHLQIVYELFLRFVASPELDAKLAKRFIDQSFILRLLDLFDSEDPREREYLKMSLHRIYGKLMAHRPFIRKSINNTFLNFVFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCVTQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMVLLFRRVAHCLNSPHFQVAERALFLWNNDHIVNLIKQNCKVILPIIFPALEKNTKTHWNQAVHSLTLNVKKIFQDLDPDLYKECLQKFEQDLSKEGEVTAGREATWKRLEEVAAKKAAGNEAVLISKTLPRKSAS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2199 525 MobiDBLite consensus disorder prediction 1 62 - -
Psa5g2199 525 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 92 503 IPR002554 GO:0000159|GO:0007165|GO:0019888
Psa5g2199 525 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 524 IPR002554 GO:0000159|GO:0007165|GO:0019888
Psa5g2199 525 SUPERFAMILY ARM repeat 104 485 IPR016024 -
Psa5g2199 525 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 524 - -
Psa5g2199 525 Gene3D - 100 502 IPR011989 -
Psa5g2199 525 MobiDBLite consensus disorder prediction 19 62 - -
Psa5g2199 525 PIRSF PP2A_B56 1 525 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2199 Psa-Chr5 173216166 173222383 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2199 K11584 - gmx:100811438 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2199 5 173216166 173222383 Psa5g2199 5 173216166 173222383 ECH