Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2197 ATGTCACAGACTTTATCCTCAAATTTGGGTCTTAATTACCAAGCCATAATTTCCAAGAGTTCATTGAAACCAACTCACTTCCCTTCATTGCAAAAACTGAAACCCCTCAGAGCCATGACAGGCGACGCAAGAGAAAAACTGGACCATGTCTCAAGTTCAAGCAACAAACCGCACCAACCTCAACCCAAAAAGAGACTTGTTCCTTCCACACCCATATGGGATAATCGATTTCCTACGGCGAAAACAGTACAAGAGATGATGGAAACAATGGAAAGAATGATGGAAGATCCATTTGCAATGAGCACAATCGAGTGGCCTTCGTCACCTCTACCGAGTGAAGGAGTAGGTGGGTATAGAAGGAGGGGAAGAGCACCGTGGGAGATTAAAGAAGGAGAAGGAGAATACAAGCTGAGGTTTGATATGCCTGGTATGAACAAAGAGGATGTGAAAGTGTGGGTGGAAGAGAAGATGGTAGTGGTTAAAGCTGAAAAAGCATCCAAAAAGAAGAAGAACGAAGAAGAAGATGAAGAATGGTCTTCAAAGAGCTATGGTAGGTATAGTAGTAGAATTGCCTTGCCGGAGAATGTGAAGTTTGAGAATATTAAGGCTGAGGTTAAGGATGGTGTTCTTTACATAACCATTCCTAAGGTTATTAGCAGCTATTCCAAAGTTATGGATATCACTCTTCAATGA 693 0.4199 MSQTLSSNLGLNYQAIISKSSLKPTHFPSLQKLKPLRAMTGDAREKLDHVSSSSNKPHQPQPKKRLVPSTPIWDNRFPTAKTVQEMMETMERMMEDPFAMSTIEWPSSPLPSEGVGGYRRRGRAPWEIKEGEGEYKLRFDMPGMNKEDVKVWVEEKMVVVKAEKASKKKKNEEEDEEWSSKSYGRYSSRIALPENVKFENIKAEVKDGVLYITIPKVISSYSKVMDITLQ* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2197 230 CDD ACD_sHsps-like 127 216 - -
Psa5g2197 230 Gene3D - 78 229 IPR008978 -
Psa5g2197 230 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 117 230 IPR002068 -
Psa5g2197 230 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 26 230 IPR044587 GO:0009408
Psa5g2197 230 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 26 230 - -
Psa5g2197 230 MobiDBLite consensus disorder prediction 42 71 - -
Psa5g2197 230 SUPERFAMILY HSP20-like chaperones 108 228 IPR008978 -
Psa5g2197 230 Pfam Hsp20/alpha crystallin family 127 226 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2197 Psa-Chr5 173189788 173191230 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2197 K13993 - gmx:100811966 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2197 5 173189788 173191230 Psa5g2197 5 173189788 173191230 ECH