Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2195 ATGGCTGAATCTTCGCCTTGTCTCTTTCGATCCTTCTCGGTTCCCTCTGACACTAGTTGTGTACCACACGAGGGTAACCCTCTTCGTGCTCTTGGAGAATCTATCTCTTTTGGGAGGTATATGTCCGAAAGCTTGAATTGGGAGAAATGGTCGGTATTCACGCAAAACCGCTATGTTGAGGAAGCTGAAAAATATTCAAAACCAGGTTCTGTTGCTGCTAAAAAAGCTTACTTTGAGGCTCATTATAAGAGAAAGGCAGCTGAGAAAGCGGCTGCGTTGGTCGAAGAAGCAAATCCAACTTTTGATTCGGAAAGTTTTGAAAAAAACTGCACTGATGCGTCCGCTCAGATAACGTCAGAAACTGAGAGCGTTGAGATGGTCAATGAAGAGATAACTAAAGATATTGTCGACTACCATGTTGTTGATTGTGATGATGATCGAAACCAATGTAAATGGGATGACAGGGAAACTGATTTGGAGATAAAGTCGGAAGCCGATAGCATTGAGATAACCAATATAGAGATAGATAAAGAGACTATTGTTTACCAAGTTGTTGATCGTGATGATACAAACCAATGTAAATGGGATGGCAGAGAAAATAATTTGGGGATAAAGTCAGAAGCCGACAGCATTGAGACAACCGATATAGAAATAAATGAAGATACTGTCGATTATCAAGTTGTTGTTTGTGATGATACAAACCAACGTAAATGGGATGACGGAGAAAAGGATTTAGACATTTCCGAGGTGGAAGTAGCAGAGAAAGTCCTATATCCTTGCAATGATATGAATCTTAATGTAGAAAGTTGCATGCTTGTTGATAATTCTAATCAGCTTGATCATGTTGAAGTCCATAAGAATACTGTCATCTCCATTGAAGAGAAGGCACCTGATCCTGGCATTACTGTTCAGGAAGTTTTGGCTTTGCCGGTCAAGGGAAGAGAAATAAATTCTTCTCCAAAATCATTGGCCAAAACTAGGGCTGAAAAACTGCCTCCTTTCTGTGAACAAAGGAAATCTTCTGCTGTTGTATCATCACGTAGAATTGGAATAATCAGTGGTTTGAAATGTGATAACTCTATTGGAGGCGTAGTCGAAAAGAATAGACTAACCGCACGGTCACTCCACAAGTCAATCAGTCTTCCTTCTGGTACTGGTGAAACAAGCAAAACAGCTGATGCAGCTTTACGATCCAGAAATGCCACAAACAGATTTTTACCAAGTAAGAATTCTGTTGGAAGCTTAGTTGAGAATAAGAGATTGGCTACATCATCACTTCACATGTCGATCAGTGTTCCATCCGGCACTGGTGTAGCAAATAAAACCACTACTACTGCATCAGTTAAACCCAGAAACGGAACAAACATTGTTGCAAAAAGTTTGAAGTCTATTGGAGCCTCAATGGAGAAGAGACTAACTTCAAGGTCACTCCACATGTCTATCAATCTCTCTTCTGGTGCTGGCGAGACAACACGAACAGCAACACAGGCATCTCACGATTTGTTAAGTCAAGCTCCAGCGAATCTTCCTTCTCAAGGCAGAAGCTGTCTGAAATCTTCAAGCACCACCCAAAGCAATCCCCGACTCCCTACCAAATCATTGCCTTTTAGATTCAGAAGTGAAGAAAGAGCAATAAAACGCAAAGAATTTTTGCAGAGGTTGGAAGAAACTAAATCCAAGGAAGAAGAGAAAGTTCAAATACAAAGGAAAGCAACTTCTAGTTCTAGCACAATAAAAAACTTGGGAAAATCACGGAAGCCTCTAATCAGCACCAATAATCCCAAACGTATTACAGAGATGAATAACCGAACAAGGCAATCAGGAACTTCATTATCAAATACCTCATGGGAAAATGCTTCTCCAAATATTCAGCATTGA 1878 0.4042 MAESSPCLFRSFSVPSDTSCVPHEGNPLRALGESISFGRYMSESLNWEKWSVFTQNRYVEEAEKYSKPGSVAAKKAYFEAHYKRKAAEKAAALVEEANPTFDSESFEKNCTDASAQITSETESVEMVNEEITKDIVDYHVVDCDDDRNQCKWDDRETDLEIKSEADSIEITNIEIDKETIVYQVVDRDDTNQCKWDGRENNLGIKSEADSIETTDIEINEDTVDYQVVVCDDTNQRKWDDGEKDLDISEVEVAEKVLYPCNDMNLNVESCMLVDNSNQLDHVEVHKNTVISIEEKAPDPGITVQEVLALPVKGREINSSPKSLAKTRAEKLPPFCEQRKSSAVVSSRRIGIISGLKCDNSIGGVVEKNRLTARSLHKSISLPSGTGETSKTADAALRSRNATNRFLPSKNSVGSLVENKRLATSSLHMSISVPSGTGVANKTTTTASVKPRNGTNIVAKSLKSIGASMEKRLTSRSLHMSINLSSGAGETTRTATQASHDLLSQAPANLPSQGRSCLKSSSTTQSNPRLPTKSLPFRFRSEERAIKRKEFLQRLEETKSKEEEKVQIQRKATSSSSTIKNLGKSRKPLISTNNPKRITEMNNRTRQSGTSLSNTSWENASPNIQH* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2195 625 Pfam Targeting protein for Xklp2 (TPX2) domain 536 594 IPR027329 -
Psa5g2195 625 MobiDBLite consensus disorder prediction 509 536 - -
Psa5g2195 625 MobiDBLite consensus disorder prediction 509 531 - -
Psa5g2195 625 MobiDBLite consensus disorder prediction 569 625 - -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 569 625 IPR044216 -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 393 IPR044216 -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 390 449 IPR044216 -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 459 499 IPR044216 -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 511 570 IPR044216 -
Psa5g2195 625 Coils Coil 551 571 - -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 511 570 - -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 459 499 - -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 390 449 - -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 393 - -
Psa5g2195 625 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 569 625 - -
Psa5g2195 625 MobiDBLite consensus disorder prediction 557 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2195 Psa-Chr5 173117647 173121137 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2195 - - mtr:MTR_3g086090 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2195 5 173117647 173121137 Psa5g2195 5 173117647 173121137 ECH