Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2190 ATGTCTTTATTTTCTCTCTTTCTCTTCACACTTCTTTTGTCAATATCATACACAACTTCACAACTTCAAGAGTTTATAAGCATTGATTGTGGAGGAACAAGAACTAACTACACAGACACAACCACAGGGATTACATGGATTTCAGATTCTGAGATAATGAAAAATGGTGAGACAGTGAAAGTGAGAAACCCTAATGGGAACAAAGTTCAGTATGAGAAACGCAGAGATTTCCCAACTGATAGTAGAAAATACTGTTATACACTTGAGACTGAGGAGAGAAGAAGGTACTTGGTAAGAGCAAGTTTTCAGTATGGGAGTTTGGAAAATGGAGATACATACCCTCAGTTTCAGCTTTATTTGGATGCAACTAAATGGGCTACTGTGTCAATTTATGATGATTCAAGAGTTTATGTTAAGGAAATGATTTTTAGGGCTCCTTTGAATTCTGTTGATGTTTGTGTGTGTTGTGCTACTACTGGTTCTCCTTTTATATCTACTCTTGAGCTTAGGCCGTTGAATCTTTCTATGTATGCTACTGATTTTGAGGATGATTTTTTCTTGAAAGTGGCTGCAAGAATTAATTTTGGTGCTCCAACTGAGGATGCTGTTAGGTATCCAGAGGATCCATATGATAGAATATGGGAGTCCGATCTTGTAAAAAGACAAAATTATCTAGTTGGAGTAGCAACAGGCACAGAAAGAATTAGCACAACAAGGAACATAGGAATAGAGACAAGAGAATACCCCCCGGTTAAGGTGATGCAAACTGCAGTGGTTGGTACAAAAGGATTACTTAGTTACAGACTCAACTTAGAAGACTTTCCCGCCAATGCTAGAGCTTATGCTTACTTAGCAGAAATTGAAGATTTGGGTCAGAATGAGACTAGGAAATTCAAATTGGAGCAACCTTATATACCTGACTATAGCAATGCAGTGGTGAACATAGCGGAGAATGCTAATGGTAGTTACACCCTTTACGAACCAAGTTACATGAATGTGAGTCTGGAGTTTGTTCTTTCCTTCTCGTTTAAGAGGACGCGCGATTCTACTAGAGGGCCTCTACTAAATGCTATGGAAATAAGCAAATATCAAGAAATTGCTTCAAAGACCTTCAAGCAAGATTCAAATTCTGTAAATGCATTTGCTTCCTTGTCTGATGAAATTATCCCAAAGAACGAAGGCGATCCTTGTGTTCCAACCCCATGGGAGTGGGTGAACTGTAGCACCGCCACACCTCCAAGAATTACAAAGATAAACTTGTCAAGAAGGAACGTGACCGGTGAAATTCCACAAGAGCTCAACAACATGGACACCTTGGAAGAATTGTGGTTAGACGGAAACTCGCTTACAGGAAAATTACCTGACCTGAGCAATCTTATCAATCTAAAGATTGTACATCTAGAGAACAATAAGTTGAACGGTCCACTACCGCCTTACCTCGGTAGCTTGCCAAGTTTACAAGCATTGTACATACAGAATAACTCATTTATCGGGGAAATACCAGCAGGATTATTGTCTTCAAAAATCACTTTCATCTATGATGATAATCCTGAACTACATAGAAAGAGCAAAAAGCATTTTCAGTTGATAATAGGAGTTTCGATCGGAGTACTAGTGATTCTACTAGTCTTGTTCATAGGGAGTTTGTTGTTATTACATTACCTAAGGAGAAAGGCTTCTCAAAAGAAAAGTGATGAAAAAGGTATTCCGGGACGCAGTAGTACTAAACATTTAACTGGATACTCTTTCGGCCGAGATGGGAATTTAATGGATGAAGGCACTGCATACTATATTAATCTCTCAGATTTGAGAGAAGCTACAAACAATTTTTCAAAGAAAATTGGAAAAGGAAGCTTTGGATCTGTCTATTATGGAAAAATGAAAGACGGAAAAGAGATCGCAGTTAAGACTATGACTGATCCATCAAGCCATGGGAACCATCAATTTGTAACCGAGGTAGCCCTCCTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGCGAAGAAGAATATCAGCATATTCTTGTTTATGAGTATATGCACAATGGCACTCTAAGAGATCACATTCATGAATGTTCGAGTCAGAAGCAATTAGACTGGTACTATGCAAATCAACAACTGACCGAAAAGAGTGATGTATACAGTTTCGGAGTTGTTCTACTGGAACTGATATCTGGAAAGAAGCCGGTATCACCAGAAGATTATGGTCCAGAAATGAATATAGTTCATTGGGCACGATCGTTAATTCGAAAAGGGGATATAATAAGCATTATGGATCCTTTGCTGATTGGAAATGTGAAAACTGAATCAATTTGGAGGGTTGCTGAAATAGCCATGCAATGTGTAGAACCACATGGTGCCTCTAGGCCAAGGATGCAAGAAGTGATTTTGGCAATACAAGATGCTTCTAAGATAGAGAAAGGAACAGAAAGTCAAATGAAATTATCATCCTCAGGTGACTCAAAACCACAATCTTCAAGGAAAACTTTGCTTACAAGTTTTCTTGAAATTGAGAGCCCTGATTTGTCAAATGGCTGTCTTCCATCAGCTAGATAA 2568 0.3851 MSLFSLFLFTLLLSISYTTSQLQEFISIDCGGTRTNYTDTTTGITWISDSEIMKNGETVKVRNPNGNKVQYEKRRDFPTDSRKYCYTLETEERRRYLVRASFQYGSLENGDTYPQFQLYLDATKWATVSIYDDSRVYVKEMIFRAPLNSVDVCVCCATTGSPFISTLELRPLNLSMYATDFEDDFFLKVAARINFGAPTEDAVRYPEDPYDRIWESDLVKRQNYLVGVATGTERISTTRNIGIETREYPPVKVMQTAVVGTKGLLSYRLNLEDFPANARAYAYLAEIEDLGQNETRKFKLEQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFKRTRDSTRGPLLNAMEISKYQEIASKTFKQDSNSVNAFASLSDEIIPKNEGDPCVPTPWEWVNCSTATPPRITKINLSRRNVTGEIPQELNNMDTLEELWLDGNSLTGKLPDLSNLINLKIVHLENNKLNGPLPPYLGSLPSLQALYIQNNSFIGEIPAGLLSSKITFIYDDNPELHRKSKKHFQLIIGVSIGVLVILLVLFIGSLLLLHYLRRKASQKKSDEKGIPGRSSTKHLTGYSFGRDGNLMDEGTAYYINLSDLREATNNFSKKIGKGSFGSVYYGKMKDGKEIAVKTMTDPSSHGNHQFVTEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHECSSQKQLDWYYANQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGPEMNIVHWARSLIRKGDIISIMDPLLIGNVKTESIWRVAEIAMQCVEPHGASRPRMQEVILAIQDASKIEKGTESQMKLSSSGDSKPQSSRKTLLTSFLEIESPDLSNGCLPSAR* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2190 855 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Psa5g2190 855 Gene3D Phosphorylase Kinase; domain 1 585 683 - -
Psa5g2190 855 Pfam Malectin-like domain 28 362 IPR024788 -
Psa5g2190 855 Gene3D Ribonuclease Inhibitor 368 522 IPR032675 -
Psa5g2190 855 SUPERFAMILY L domain-like 394 506 - -
Psa5g2190 855 MobiDBLite consensus disorder prediction 812 834 - -
Psa5g2190 855 SUPERFAMILY Protein kinase-like (PK-like) 596 801 IPR011009 -
Psa5g2190 855 ProSiteProfiles Protein kinase domain profile. 608 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g2190 855 Pfam Protein tyrosine and serine/threonine kinase 708 800 IPR001245 GO:0004672|GO:0006468
Psa5g2190 855 Pfam Protein tyrosine and serine/threonine kinase 610 698 IPR001245 GO:0004672|GO:0006468
Psa5g2190 855 Gene3D Transferase(Phosphotransferase) domain 1 705 826 - -
Psa5g2190 855 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Psa5g2190 855 PANTHER OS07G0107800 PROTEIN-RELATED 17 704 - -
Psa5g2190 855 PANTHER OS07G0107800 PROTEIN-RELATED 705 820 - -
Psa5g2190 855 PANTHER - 17 704 - -
Psa5g2190 855 PANTHER - 705 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2190 Psa-Chr5 172941577 172947219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2190 705 855 Receptor kinase-like Gene Family AT1G67720 73.026 2.01e-56 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa5g2190 Malectin_like 1.3e-86 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2190 - - aprc:113850330 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2190 5 172941577 172947219 Psa5g2190 5 172941577 172947219 ECH