Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2188 ATGTCTGAGAATAATCACGTAGCAGAGCAAGATTCGGATTCGGATCCTCATTTGAGAACCCAATCAAATGGGGATGCGGAATCAACCATTGATACTTATCAAGATCAGGTAACTCATGTTGATCTCAAAGATGAAGTTTTGGAAGAACCTGAAGATGGAATATCCACAGATACTGCCAAAGAGGACATGTTTGAAGATTGCCCTGACGAGCTAATTACGCTCGATGGTAGGATAAAGGAAGAAGAAGCTGTAGCTGATGAACATGAAGATGAGAAGGAAGAGGAAAGTCCAATTCTTCATCAACAAGAGAGTCGTTTTGTTGAATTTGACAATGGTGCAGCGGGGGAGCTGGAACAGCTGCGTATAAAGTTGGAGAATGCTGTTGCTGAGAAAGAAAGTGTTGTGGAGGAATACCAGGAACTTTTATCTGCGAGGGACCGTGAGATAGAGAATCTAAATGCGAAGGTTTCTGAATTAGTGCTATCCAATGAGAGCTTGCAAGTTTCGTCACAAGCTCAGTTTGAAAAAGATGGTAATATTGATGTTGTGGTGGATAAGATGATATATTCTCTTGCAACTGTTGTTAATCGAGAGCGAGTATCGGATAATTCTAGAAGTGGGAAAATATTTTATATCGAGGAAAGTACTGCACTTCTGATTGAAAAGTATAATCAGTTTCTTTCTGAAATTTATCAACTCGGACAGTCGTTTTCTGAAGTTGGCTTGGGTACTATAGCGAATGAATATGGGAACATACTTGTTGATGCTCGGGGTGGGTTGCTAGAGCTCAAGAGAAAGGAAGAAGAATTGGTTCAAAAACTGTCTCATTTAGAAGATGAAAATCACAAGCTGGTTGAAGAGCTTGACAAGGAAAAGGTGATAATAGGGACATTGACTACTCAGCTTGGAAATGTAAAGGTAGAACTAGAGCAGGAAAAGGTTAAATGTGCTAATACCAAAGAAAAGCTTAGTATGGCTGTGACAAAAGGAAAGGCCTTGGTCCAGCAGCGAGATTCACTAAAGGCATCGCTGGCTGGTAAATCCAGTGAGCTTGAGAAATGTCTAATTGAACTGCAGGAGAAATCAGCTTCACTAGAAGCTGCTGAACTTACTAAAGAAGAGTTGGCCCGGACTGAAAATATGGTTGCATCCCTGAATAATTCATTACAGCAAAATCATACAATTTTTGAGCAAGTAGAAGAAATCTTGTCTCATGCCGAACTTGATCAGCCTGAAATGCTTGATTTGCCAGAGAGACTAAGATGGCTTGTGGATGACAGAAATAAACTTAAGGGCACCTTCTTGGAACTACGCAAATTGAAGGATTCTCTATCTCTATTAGACCTACCAGAGTCTGTTTCATCATCTGATCTGGAATCACAAATGAACTGGTTTATAGATTCTTTTCGTAAGGCCCACAATAATATTTATGCTCTACATGAAGAAGTTTCTACAATCAAGGAAGCATCCATAAATCATATTGATCAGATGAGTATTTCACTTTTGGTGGACTCACAAGAAAAAGATTACCTTCAGGCTGAATTAGCAGATATGAGGTTTGAATATGGAGAGCTTGTTGGCAAGAACCATCAGATTTCTTTGGAGAAGGATCAGATAGTGAAAATGTTAATTGATTTTTCCGGTCTAAACATGAATGATGAAGGAATTGATCAATTCTCTTCCACCACTTTGATGATCATTGACTTATGTTTTCAAAAATTGAAAGGACAGAGTGGTTCTCTCTCCAAAGCATCTCATATTGATTCCGCATTGTTTGAAAAGATTCAAAGTCTCCTGTATGTCAGGGATCAGAGCTTAATGCTGTACGAAGACATACTTGAAGAAGATTTTCTAATTAGATCTGATGTGAATAAGCTGTCAAACGAGTTAAAAGTGGTATCTGAGGAAGTTATAGCACTGAAAGAAGAAAGGCGTTCTCTGCTGAAAGATCTTGAACGATCAGAGGAAATTCAAAGTCTCCTGTATGTCAGGGATCAGAGCTTAACGCTGTATGAAGACATACTTGAAGAAGATTTGCTAATTAGATCTGATGTGAATAAGCTGTCAAATGAGTTAAAAATGGTATCTGAGGAAGTTATAGCACTGAAAGAAGAAAGGAATTCTCTGCTGAAAGATCTTGAACGATCAGAGGAAAAGACTGGCATGCTTAGGGACAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGATTAGTTCAAGATAGGGACAATCTAAAAGGTCTTATAAATGAAAAGAACTCAGAGATTGAGCAGTTGAAGGTTGATTTGCAGAAGCATGAATCTGCAGTTTCTGAATACAAGGATGAGATCAAGAGATTGTCCAGTGATTTGGAAAGCATTCCTAAACTAGAGAATGATCTTCTCGAAATAAAAAAGGAAAGGACTCGGTTTGAACAGTTTTTGATGGAGAGCAATAACATGTTGCAGAGAGTGATGGAATGCATTGATGGCATCGTTCTTCCAGTTGATCCAGTTTTTGGCGAACCTATAGAAAAGGTGAAGTGGCTTGCTGGTTTTGTCAATGATTGCCAAGATGCTAAGGTGCATGTAGAGCAACAGTTGCAGTTAGTTAAGGAGGAAGCCAGTATACTTGAAGTTAAATTGGCAGAAGCCCAAGAAACTGTGAACTCCCTTGAGCAAAGATTATCTTCTTCAGAGGATACTGTTTCTCAACTTGCTGAAGAAAAGACAGAGTTAGAACGCGAGGGAGAAAAAGTTGTGGAAGAGTTGCAGAGTGTTAAAGAAAAAGTTGCTGAAGCTCGCAGTACTAATAAGCTACTTGAAGATGCTTTATCACAGGCAGAAAAAGATATTTCTGTGCTTTCTGAAGAGAAAGAGCAGGCTCAAGTATCTAGAGTTGCTGCAGAGACAGAGTTAGAGAGATTTAGAGACGAAGCAGTCAGGCAGACAGGAGAACTAGCAGAGGCCAGCAGAACAATAAAGGATCTAGAAGTTGAACTATCTCAGGTTGAGAGTAAGGTCAATTTGTTGACTGAAAAGTATAATGCTGATCAAGTTGTCAAGACTGATCTGGAAAATGAATTGAAGAAGCTGCAAGATGAAGCAGCAAATGATGCTAGCAAATCAGTTGCTGCAGAGACAGAGTTAGAGAGAGTTAGAGCTGAAGCAGTCAGGCAGACAGGAGAACTAGCAGAGGCCATCAAAACCATAAAGGATCTAGAAGTTGAACTATCTCAGGTTAAGAGTAAGGTCGATATTTTGACTGAAAAGTGTAATGCTGATCAAGTTGTCAAGACTGATCTGGAAAATGAATTGAAGAAGCTGCAAGATGAAGCAGCAAATGATGCTAGCAAATCAGTTGCTGCAGAGACAGAGTTAGAGAGAGCTAGAGCTGAAGCAGTCAGGCAGACAGGAGAACTAGCAGAGGCCATAAAAACCATAAAGGATCTAGAAGTTGAACTATCTCAGGTTGAGAGTAAGGTCGATATTTTGACTGAAAAGTATAATGCTGATCAAGTTGTCAAGACTGATCTGGAAAATGAATTGAAGAAGCTGCAAGATGAAGCAGCAAATAATGCTAGCAAATCAGTTGCTGCAGAGACAGAGTTAGAGAGAGTTAGAGCTGAAGCAGTCAGGCAGACAGGAGAACTAGCAGAGGCCATCAAAACCATAAAGGATCTAGAAGTTGAACTATCTCAGGTTGAGAGTAAGGTCGATATTTTGACTGAAAAGTATAATGCTGATCAAGTCGTCAAGACTGATTTGGAAAATGAATTGAAGAAGCTGCAAGATGAAGCAGCAGATAATGCTAGCAATTCAGTAGGTTCCTCTGCACCTATAAGATCACTGGAAGATGAATTGTTGAAGGCTCGAGATGATATTTCTACCCTAGAAAATGCAAATGAAATTGCCAAACAGGAAATATCTTCGCTCAGTTCAAAGTTAAGTTCATACATGGTTGACTTATCAGGAAAGAATGGCTGCTTAGGTACCAAATCCCTAGCGCTCCTTACATCCTTTAATTATCTTCAAGTGCTTATTAGAGATGATACTCTATTTCTCAAGATAAAACAATGCTTTGAGAGGAAATGTGAGACCTTGAAGAAAGTGGATCTCACTGTGAACAAAGTAAATAACTATCTTACCCTGGCTGCTAAGGATTCCGAAGGGCACCTCGAGATGGAGGAAGATCCACCCGTAAGAAAATCATTTACTGGCAGCCTTGAAAATTTTGAAGTTGAAATGGACAAAGGAGAGACTAATGGCATTACTATGGAGACCATAATCTCATCAATTGGAAAAATTGCAGACGAATTAACGTTGAGAAGCAAACATATTGCAGATGCGTTTGATGAATATTCGGATTCTATTGATGAATTTCTTTCTCCTCTCCCTGGAAAACTACTGGAAACCGAGTCAAATATAATGGCTATTGTTGAGCACATGAAAATTATGAAAGAAGAGGCAAATAGCGTGGCAAAGTTGAACGAAGAAAAGGATAATATTATCGCCACTTTAGAGAATGATATCAGTTTATTGCTGTCGTCATGCACTGATTCTACCAGTGAACTTCAGAATGAAGTTGACCAAAATCTTGGGCAACTTGGCTCCACTTTTGAGGATGAGAAGTTCAACCATGAAGCAGATGAACAAGTAGAACATCATAGAAACAGTAAATATGCAGATGCATCAAGAAAGTTGATAAATGCTTCTGGAAAAGTTCAAACTTTGATTAGACAGTTCAAATTGAAAAGTGAGCAAGTAGATACAACAGTTAGAGATTTGCAGGCCAAATTAAATGAAACAACAGTTGCTTTTGAATTGGCTACAGAGGAGAAAGACTTCAATAAGAACAGAGTTTTGCAGTTGGAGTCTGATATTCAATCACTCGAAATTGCTTGCAGTGAGCTTAAGGATAAGGTAGAAGGTTATCACGTCCTAGAAGAAAAATTAAAGGAGAAAGAGGAAGAGATTTCATCAATGCACAGTGCTTTGGTGGCAAAAGAAGAAGAAAGCTCCATCCTCTCGGCATCTCAGTTAAAAGATATCTTTGACAAGTTAGATAGGATCGATATTCCTATTGTAGAGTCTGGAGACGATTTGGAGCTACATACTTCAGACCCTGTGAAGAAGCTCTCTTATATTATTGATAGTGTTACTAGGTTGCATCATGAAATAAATTCTCTGTCTCATGATAAAAAAGAGATGCAAACAATCCTTGATACTAAGGTTCTTGAAATTAATGATTTAGAGGAGGAAGTCAAACAACTCAATAGACACTGTGAAGACTCAAAAATGGTTAAAAGCGAACTTTTTGAACTAACCTCTGTCTTGGAAAAAATTATAGATATTTTGGGAGCCAACGACGACTGGGTTGTAGATAGAAAATCTAAAGGTGTTAGAGAATTATTGCCAGCGTTGGAAAAGCATATCATTGCCATTATTTCGGAATCTGAAAATTCAAAATCTAAGGCCCAGGAACTTGGTATTAAATTAGTTGGAAGTCAGAAGGTTATTGATGAGTTAACGACCAAGATTAAGTTACTTGAAGATTCAATTCAAGATAGGAACTCTCAGCCAGAAATCGTCCAGGAAAGGAGCATATATGAAGCACCCTTATTACCTGCTAGCTCCGAGATAACTGAAGTTGAAGAGGGATCTCGTGGCAAGAAAGCATTATCTCCTGTCCCACCGGCTGCTCACTCACGTGTTATGAGAAAAGGATCTACTGAACATCTTGCACTTGATATTAGTGTGGAGTCTGATCATTTAATCAACAGTACTGATACTGACGACGATAAAGGTCATGTATTCAAGTCTCTGAACACTTCTGGATTCGTACCGAAACAAGGAAAGCTCATTGCCGATCGTATTGACGGAATATGGGTATCTGGTAGCGGTGTTCTCATGAGTCGGCCGAGAGCAAGATTAGGACTCATCGGCTATCTGCTAATCATGCATATATGGCTACTGGGGACAGTATTGTAG 5967 0.3912 MSENNHVAEQDSDSDPHLRTQSNGDAESTIDTYQDQVTHVDLKDEVLEEPEDGISTDTAKEDMFEDCPDELITLDGRIKEEEAVADEHEDEKEEESPILHQQESRFVEFDNGAAGELEQLRIKLENAVAEKESVVEEYQELLSARDREIENLNAKVSELVLSNESLQVSSQAQFEKDGNIDVVVDKMIYSLATVVNRERVSDNSRSGKIFYIEESTALLIEKYNQFLSEIYQLGQSFSEVGLGTIANEYGNILVDARGGLLELKRKEEELVQKLSHLEDENHKLVEELDKEKVIIGTLTTQLGNVKVELEQEKVKCANTKEKLSMAVTKGKALVQQRDSLKASLAGKSSELEKCLIELQEKSASLEAAELTKEELARTENMVASLNNSLQQNHTIFEQVEEILSHAELDQPEMLDLPERLRWLVDDRNKLKGTFLELRKLKDSLSLLDLPESVSSSDLESQMNWFIDSFRKAHNNIYALHEEVSTIKEASINHIDQMSISLLVDSQEKDYLQAELADMRFEYGELVGKNHQISLEKDQIVKMLIDFSGLNMNDEGIDQFSSTTLMIIDLCFQKLKGQSGSLSKASHIDSALFEKIQSLLYVRDQSLMLYEDILEEDFLIRSDVNKLSNELKVVSEEVIALKEERRSLLKDLERSEEIQSLLYVRDQSLTLYEDILEEDLLIRSDVNKLSNELKMVSEEVIALKEERNSLLKDLERSEEKTGMLRDKLSMAVKKGKGLVQDRDNLKGLINEKNSEIEQLKVDLQKHESAVSEYKDEIKRLSSDLESIPKLENDLLEIKKERTRFEQFLMESNNMLQRVMECIDGIVLPVDPVFGEPIEKVKWLAGFVNDCQDAKVHVEQQLQLVKEEASILEVKLAEAQETVNSLEQRLSSSEDTVSQLAEEKTELEREGEKVVEELQSVKEKVAEARSTNKLLEDALSQAEKDISVLSEEKEQAQVSRVAAETELERFRDEAVRQTGELAEASRTIKDLEVELSQVESKVNLLTEKYNADQVVKTDLENELKKLQDEAANDASKSVAAETELERVRAEAVRQTGELAEAIKTIKDLEVELSQVKSKVDILTEKCNADQVVKTDLENELKKLQDEAANDASKSVAAETELERARAEAVRQTGELAEAIKTIKDLEVELSQVESKVDILTEKYNADQVVKTDLENELKKLQDEAANNASKSVAAETELERVRAEAVRQTGELAEAIKTIKDLEVELSQVESKVDILTEKYNADQVVKTDLENELKKLQDEAADNASNSVGSSAPIRSLEDELLKARDDISTLENANEIAKQEISSLSSKLSSYMVDLSGKNGCLGTKSLALLTSFNYLQVLIRDDTLFLKIKQCFERKCETLKKVDLTVNKVNNYLTLAAKDSEGHLEMEEDPPVRKSFTGSLENFEVEMDKGETNGITMETIISSIGKIADELTLRSKHIADAFDEYSDSIDEFLSPLPGKLLETESNIMAIVEHMKIMKEEANSVAKLNEEKDNIIATLENDISLLLSSCTDSTSELQNEVDQNLGQLGSTFEDEKFNHEADEQVEHHRNSKYADASRKLINASGKVQTLIRQFKLKSEQVDTTVRDLQAKLNETTVAFELATEEKDFNKNRVLQLESDIQSLEIACSELKDKVEGYHVLEEKLKEKEEEISSMHSALVAKEEESSILSASQLKDIFDKLDRIDIPIVESGDDLELHTSDPVKKLSYIIDSVTRLHHEINSLSHDKKEMQTILDTKVLEINDLEEEVKQLNRHCEDSKMVKSELFELTSVLEKIIDILGANDDWVVDRKSKGVRELLPALEKHIIAIISESENSKSKAQELGIKLVGSQKVIDELTTKIKLLEDSIQDRNSQPEIVQERSIYEAPLLPASSEITEVEEGSRGKKALSPVPPAAHSRVMRKGSTEHLALDISVESDHLINSTDTDDDKGHVFKSLNTSGFVPKQGKLIADRIDGIWVSGSGVLMSRPRARLGLIGYLLIMHIWLLGTVL* 1989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2188 1988 MobiDBLite consensus disorder prediction 1 20 - -
Psa5g2188 1988 Coils Coil 260 294 - -
Psa5g2188 1988 Coils Coil 1613 1664 - -
Psa5g2188 1988 MobiDBLite consensus disorder prediction 21 36 - -
Psa5g2188 1988 PANTHER BNAA09G28150D PROTEIN 45 140 - -
Psa5g2188 1988 PANTHER BNAA09G28150D PROTEIN 954 1008 - -
Psa5g2188 1988 PANTHER BNAA09G28150D PROTEIN 132 656 - -
Psa5g2188 1988 PANTHER BNAA09G28150D PROTEIN 1298 1988 - -
Psa5g2188 1988 PANTHER BNAA09G28150D PROTEIN 655 909 - -
Psa5g2188 1988 PANTHER BNAA09G28150D PROTEIN 907 958 - -
Psa5g2188 1988 Coils Coil 623 657 - -
Psa5g2188 1988 Coils Coil 358 388 - -
Psa5g2188 1988 Coils Coil 71 91 - -
Psa5g2188 1988 Coils Coil 741 782 - -
Psa5g2188 1988 Coils Coil 685 719 - -
Psa5g2188 1988 SUPERFAMILY Tropomyosin 919 1102 - -
Psa5g2188 1988 PANTHER - 954 1008 - -
Psa5g2188 1988 PANTHER - 907 958 - -
Psa5g2188 1988 PANTHER - 132 656 - -
Psa5g2188 1988 PANTHER - 1298 1988 - -
Psa5g2188 1988 PANTHER - 655 909 - -
Psa5g2188 1988 PANTHER - 45 140 - -
Psa5g2188 1988 Coils Coil 117 155 - -
Psa5g2188 1988 Coils Coil 1049 1111 - -
Psa5g2188 1988 Coils Coil 1726 1760 - -
Psa5g2188 1988 SUPERFAMILY Tropomyosin 1093 1310 - -
Psa5g2188 1988 Coils Coil 1478 1498 - -
Psa5g2188 1988 Coils Coil 1273 1307 - -
Psa5g2188 1988 Coils Coil 1203 1265 - -
Psa5g2188 1988 Coils Coil 1832 1852 - -
Psa5g2188 1988 Coils Coil 1119 1188 - -
Psa5g2188 1988 Coils Coil 846 1034 - -
Psa5g2188 1988 Coils Coil 1585 1605 - -
Psa5g2188 1988 MobiDBLite consensus disorder prediction 1 66 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2188 - - mtr:MTR_3g086150 2088.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2188 5 172883578 172891823 Psa5g2188 5 172883578 172891823 ECH