Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2187 ATGGCTTCGTATTCCGAACAAGATGGAAAACCTCTGCCAAAATTCGGAGACTGGGATGTAAACGATCCAGCCTCGGCTGAAGGGTTTACTGTTATATTCAACAAGGCGAGAGACGACAAGAAAATCGCATCCGCTTCTGGACGCTTTCCTTCGCAACGAAGATACGACTCTCGCGGTCGCAACAAGAATAATAATAAAAACACAAAGACCTCATCAAAGAAAAAATGGTTTTGCTTTAGTGCTTAG 246 0.435 MASYSEQDGKPLPKFGDWDVNDPASAEGFTVIFNKARDDKKIASASGRFPSQRRYDSRGRNKNNNKNTKTSSKKKWFCFSA* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2187 81 MobiDBLite consensus disorder prediction 42 81 - -
Psa5g2187 81 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 78 IPR040387 -
Psa5g2187 81 MobiDBLite consensus disorder prediction 64 81 - -
Psa5g2187 81 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Psa5g2187 81 PANTHER PROTEIN NOI4 6 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2187 Psa-Chr5 172882356 172883552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2187 - - gmx:102669045 128.257