Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2185 ATGGATTACACACATTTCTTCCTACTAGCAACAACCACTTTAGGTTTCATCTCCATCTCCAAATCTCTCTTCAATTTTCTCGTCTGGATATACGCCACCTTAATCCGACCAACAAAGCATCTCAAAGACTACGGTTCATGGGCTATTATCACCGGCTCAACCGACGGAATCGGCAAATCCATGGCTCTCGAGCTCGCAGCCAACGGACTCAACCTTCTCTTACTCGGTCGAAACCCTCTTAAGCTCGAAGCAACGTCAAAAGAGATAGTAGACAAACATTTCACCAACGTTCAGGTAAAATATCTTGTTGTAGACCTGCAGAACAATAGCGGTGACGAAATAATGAAGAAAATTGAAGAAGCTATTGCTGATTTAGATGTTGGAATTCTAGTTAATGCCGCCGGCGTGGCCTATCCTTATGCTAGATATTTTCATGAAGTTGATTTAGATTTGATGGATACTATTATTAAAGTCAATATAGAAGGAACAACTTGGGTTACAAAAGCTGTGATTCCTAGTATGATTAAGAAGAAAAAAGGAGCTATAATTAACATCGGTTCTGGTTCCACTGTTGTTCTTCCTTCTTATCCTCTTGTCACACTTTATGCAGCTTCAAAATCGTATCTTGCCATGTTCTCTGCATGCACCAATTTGGAATACAAACACCAAGGTATTGACATCCAGTGTCAGGTTCCGTTGTTTGTGTCGACGAAAATGACAAGGATGAAGGCTTCTCTGTTTGTTCCAACACCAGATGTATATAGCAAAACATGTGCCTCTATGCTAAATTTTTCAAAGCTCCCAAAAAACTCAAGGATTGATGAATGA 828 0.401 MDYTHFFLLATTTLGFISISKSLFNFLVWIYATLIRPTKHLKDYGSWAIITGSTDGIGKSMALELAANGLNLLLLGRNPLKLEATSKEIVDKHFTNVQVKYLVVDLQNNSGDEIMKKIEEAIADLDVGILVNAAGVAYPYARYFHEVDLDLMDTIIKVNIEGTTWVTKAVIPSMIKKKKGAIINIGSGSTVVLPSYPLVTLYAASKSYLAMFSACTNLEYKHQGIDIQCQVPLFVSTKMTRMKASLFVPTPDVYSKTCASMLNFSKLPKNSRIDE* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2185 275 PIRSF 11-beta-HSD1 1 271 - -
Psa5g2185 275 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 4 267 - -
Psa5g2185 275 CDD 17beta-HSD1_like_SDR_c 45 266 - -
Psa5g2185 275 Pfam short chain dehydrogenase 47 242 IPR002347 -
Psa5g2185 275 PRINTS Glucose/ribitol dehydrogenase family signature 47 64 IPR002347 -
Psa5g2185 275 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Psa5g2185 275 PRINTS Glucose/ribitol dehydrogenase family signature 174 190 IPR002347 -
Psa5g2185 275 PRINTS Glucose/ribitol dehydrogenase family signature 202 221 IPR002347 -
Psa5g2185 275 PRINTS Glucose/ribitol dehydrogenase family signature 223 240 IPR002347 -
Psa5g2185 275 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 252 IPR036291 -
Psa5g2185 275 Gene3D - 41 264 - -
Psa5g2185 275 PANTHER RH59310P 4 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2185 Psa-Chr5 172241632 172244355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2185 7 265 Lipid Metabolism Gene Families AT1G67730 50.769 5.73e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2185 K10251 - gmx:100816067 366.696