Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2147 ATGGCGGAGCTCCGTCACTCCTCCTCAATCGGCTCCCGAACCGCTTCTTCTCCGATGAAGCGCGATGGCGCCGGCGCCGGCGATTCCTCCCCACTCATTCCCGAAAACGACCTCTCCGACGATGATCGCCACTCTCCCAAGGACCGGGACCGTCCTCCCTGCTCGCATTTTCATCACCTTTTCTCCCACTTCACCGACGACCATAGGGTTCCTCTTCACAACTCCAGGATCTCTATTTTCTTCACCTTACTTCTACTTCTCGCTGGCTTGCTCGCCCTGTTCACGATCCTCCATAAACTGAATTCCCCTTACTTGTGTAAAAAAGATGGGATTGTTCTTCACTGTCCACATGTCAAAGAATCAGCATCTCTTTGGGAAAATCCTTACTCATCCACAACATCGTGGAAGCCGTGTGCTGAGCGCAGAGATGGTGCCATATCAGAACTTCCTCAGGAAAATGCAACAAATGGCTATATATTCATTCACGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTTGCAAAAATAATGAATGCCACTCTTATTTTGCCTGTATTGAAACAGGACCAAATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGACCACTTCATTGACTACCTAAAGTATGATGTGCGTATTGTCCGCGATATCCCAGAATGGTTTACTGATAAAACAGAGCTATTTTCTAGTATAAGACGAACCGTGAAGAACATTCCAAAATATGCACCTGCACAATTTTACATCGACAATGTTCTGCCTCGCATCAAGGAGAAAAAGATTATGGCTCTGAAACCATTTGTTGATAGGCTAGGATATGACAATGTTCCTTCAGAAATCAACAAGTTGAGATGTAGGGTCAATTATCATGCTCTGAAGTTTCTTCCCGATATAGAGCAGATGGCAGATTTACTAGCATCAAGGATGAGAAACCGAACAGGCAGTTCAAACCCATATATGGCATTGCATCTTAGATTTGAAAAAGGAATGGTGGGCCTTTCGTTTTGTGATTTTGTGGGGACAAGAGACGAGAAGGCTAAAATGGCAGAATATAGAAAAAAGGAGTGGCCTCGACGGTATAAGAATGGTTCCCACTTGTGGCAATTGGCTCTGCAGAAGCGAAAGGAAGGGCGTTGCCCTCTAGAGCCTGGCGAAGTGGCTGTTATTCTTCGGGCTATGGGCTATATGAAGGAAACTCAAATTTACGTAGCTTCTGGACAAGTTTATGGTGGACAGAATCGGATGGCTCCTCTAAGGAATATGTTCCCTAATCTGGTTACAAAGGAGGAGTTGGCAACTAAAGAGGAGTTAGATGGTTTCCGAAAGCATGTGACGAGCCTTGCAGCTCTTGATTTCTTAGTGTGCTTGAAGTCAGATGTATTTGTGATGACCCATGGAGGCAATTTTGCTAAGCTGATAATTGGGGCCCGAAGATACATGGGTCACCGGCTAAAGTCAATTAAGCCTGACAAAGGACTAATGTCCAAGTCTTTTGGGGATCCGTACATGGGTTGGGCTCCTTTTGTAGAAGATGTAATTGTGACTCATCAGACACGGACGGGATTGCCAGAAGAGACTTTCCCTAACTACGACCTGTGGGAGAACCCTCTGACTCCTTGCATGTGTAAAGCCTGA 1665 0.4541 MAELRHSSSIGSRTASSPMKRDGAGAGDSSPLIPENDLSDDDRHSPKDRDRPPCSHFHHLFSHFTDDHRVPLHNSRISIFFTLLLLLAGLLALFTILHKLNSPYLCKKDGIVLHCPHVKESASLWENPYSSTTSWKPCAERRDGAISELPQENATNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPEWFTDKTELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPSEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTRDEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYMKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWAPFVEDVIVTHQTRTGLPEETFPNYDLWENPLTPCMCKA* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2147 554 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 554 - -
Psa5g2147 554 PIRSF UCP009360 39 554 IPR024709 -
Psa5g2147 554 CDD O-FucT_plant 158 493 IPR024709 -
Psa5g2147 554 Gene3D - 296 497 - -
Psa5g2147 554 MobiDBLite consensus disorder prediction 36 50 - -
Psa5g2147 554 MobiDBLite consensus disorder prediction 1 50 - -
Psa5g2147 554 Pfam GDP-fucose protein O-fucosyltransferase 158 490 IPR019378 -
Psa5g2147 554 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2147 Psa-Chr5 167543148 167550911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2147 124 553 Miscellaneous Gene Families AT1G22460 35.746 4.38e-92 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2147 - - gmx:100809112 1022.31