Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa5g2119 | ATGACTTCTACAAGTGACATGATATATGCTTCCATGGCTTCACTTAATTCATATCAAATCTCAACCACTATCATATTTTTACTTCACCTTCTGCTTCTTCCAGTTTCTTGCTTCTACCAATCACAATCTGCAATTCCTCCAAGGGGGTTATTATTTGAAGAGAAAAACAGGTTAGGTTCGGCTCCACCTACATGTCACAACAAGTGTAACCAATGTCATCCATGCATGGCAGTGCAAGTTCCGAGCCATGAACATGTTCAACCAGGTCATACTCATAGTGCTGCTTCAAATTCTGCCATGGAAGATGGATTCTTTCTCCAAGATAGTGGTAATACTAACAACAGGTATTCAAATTACAAGCCATTGAGTTGGAAATGCCATTGTGGTGACCACTTTTTCAATCCTTAG | 408 | 0.3971 | MTSTSDMIYASMASLNSYQISTTIIFLLHLLLLPVSCFYQSQSAIPPRGLLFEEKNRLGSAPPTCHNKCNQCHPCMAVQVPSHEHVQPGHTHSAASNSAMEDGFFLQDSGNTNNRYSNYKPLSWKCHCGDHFFNP* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa5g2119 | 135 | Pfam | Epidermal patterning factor proteins | 57 | 135 | - | - | |
| Psa5g2119 | 135 | PANTHER | EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 | 10 | 135 | IPR039455 | GO:0010374 | |
| Psa5g2119 | 135 | PANTHER | EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1 | 10 | 135 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa5g2119 | Psa-Chr5 | 165034689 | 165036041 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa5g2119 | - | - | mtr:MTR_3g087020 | 193.356 |