Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2101 ATGGATACTTATGTAAACTTCAGCTGCGAGCTAAGAATAATACAAGCACGAAACGTTGAATTCATCAAGTCCACCAAAAACTTGTTTGCCAGGATTTATCTTCCAATAGGAAACAACAAAAGAATTCAACTCAACAGCAAAAATGTTTCTACCAAACTAGGATCCTTTTGGGACGAATCTTTTAATCTTGATTGTTCTTGTCCCCAAGAGTTCTTAGAAAACCTTAATCAACAAAGCCTGGTATTGGAGCTAAGGCAGAAGAAGATGTGGGGCTCACAACTTATTGGAAAAGGTGAAATTCCATGGAAGGTGATTCTTCAATCACAAAACATGGAGTTAAAAAAATGGTTGAAAATGGATTTGAAGAGTGGAAGTGATAGCAAAGAGGTTATGTTGACAACACCAGAAGTGGAAGTGGAGATTAAAGTAAGAGTCTCTTCGGATGCTGAGGTGGAGATGCAAAGTAAAAGGAGGTTTAATAATTGGAATGAGTGTGGATGTAAAAATGGGCATGATCATAATGCTTGGTGTAACGCAGAAGATTGTGATATGTTTGCGCTTGGTGCAGCTTTGGAGGCTTTTTGA 585 0.3812 MDTYVNFSCELRIIQARNVEFIKSTKNLFARIYLPIGNNKRIQLNSKNVSTKLGSFWDESFNLDCSCPQEFLENLNQQSLVLELRQKKMWGSQLIGKGEIPWKVILQSQNMELKKWLKMDLKSGSDSKEVMLTTPEVEVEIKVRVSSDAEVEMQSKRRFNNWNECGCKNGHDHNAWCNAEDCDMFALGAALEAF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2101 194 Gene3D C2 domain 2 145 IPR035892 -
Psa5g2101 194 PANTHER OSJNBA0006M15.15 PROTEIN 2 194 - -
Psa5g2101 194 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 126 IPR035892 -
Psa5g2101 194 Pfam C2 domain 10 112 IPR000008 -
Psa5g2101 194 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2101 Psa-Chr5 164052898 164055310 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2101 - - gmx:100807677 263.848