Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2093 ATGAAAAAAATGGGAGACCATTCGCCAGAAAGAAAAGTAGGCTGTGGATTGATAACAAACGTATTTGGATTCGGACGACATAGTATATGGCCGAGGAAAACATCATCTGCGAATTCTCTTCCCTTACCAAGCAATGCTGCAAATGATCAAAAACGACGTCGAAGTGCTTCTAACGAGGTTGTTTACGTCGATCCACCTTCGCGCAATACTTCGACTCCGAGGTCTGTTTCAAAGCCTACTTGTGCATCAAATAATAATACTACTAATAATAATAATAATAATCCGCCGAGAAGAAACCAACACCAAACAACAATGGCAATGCCACGCGTTGTTCCTGTTCATGTTCCGTCTAAGGCTTCAATTTCACCATCTACTCAGGGGTATGTTAATCAAGGAAGGAGGGTACAAAAGGAAGCTATTGGAATTTCAGGTGAGTTAGAAAGTATGATCAATGATCATCAAAAGTCGAAGGGGAGTGGTAATCTCGTTCGCGCTTCTTCTGGCAATGTTATGTTGTTTGGGAATTTAGGTAATATTAGGCAAGGAGATAAAAATGATAGTTATTCAATTGCAATGGATAATTATAACCAGTATTTTGAAAATTCAAATTCAAATGGAGGAGGAGGAGGACACAAGAAGAAGAATGTGGTGAGTATTAGTAATGAGACGAAACCACCAATGAATTCAGGTGGTGGTTCGCTTTGTAGGGCTATATCGACTAGAATGGATCCAGAACAATTGAAGATAATGGGGAATGAGGATTATAAGAATGGAAGATTTGCGGAGGCGTTAGCGTTGTATGATGCAGCTATTTCAATCGATCCTAAGAAGGCTTCGTATAGAAGTAATAGAAGTGCGGCCTTAACTGGTCTTGGTAGGCTTCTTGAAGCTGTGTTTGAATGTAGGGAAGCTATTCAGATTGATCCTCATTATCATCGAGCTCATCATCGTTTAGGAAATTTGCATTTAAGACTAGGAGAAACTGATAAGGCTCTATATCATTATAAACAAGCGGGACCAGAGGCTGATCCGGATGAGGTTGCTAAAGTGAAGATTCTTCAAGCTCATCTAAATAAATGCACTGAGGCTCGCAGGTTAGGAGATTGGAACACACTCATTACCGAGGCTTCCAACACTATATCATCTGGTGCAGATTCTGCTCCACAGATATTTGCATTGCAAGCCGAAGCTTTGATAAAACTCCGTAGGCATCATGATGCTGACAATGTAATGTCAAAGGGTCCTAATTTTGATGTTGACGATTGTACAAAGTTCTTCGGACCAATTGGTAATGCAAATTTGTTAGTCACTCGCGCTCAAGTTGATCTGGCTGCTGGCAGATTTGATGATGCTTTAGAGGCAGCACAGAAAGCAGCAAGGCTAGATTCAAACAACAAGGCAGCAATGAAGGTGTTGAGAAAGGCTCGAGCCGTGACAGCTGCAAGAGGCAGAGGAAACGACCTTTTCAAGGCGTCGAAATTCTCTGAGGCTTGTATTGCATATGGAGAAGGGCTTGAGAATGATCCATGTAACGCAGTTTTACTATGCAATCGGGCAGCTTGTAGATTAAAACTCGGCCAATTAGAGAAAGCGGTGGAAGATTGTTGTGCGGCGCTTAGCTTGCGCCCATCTTACACCAAAGCAAGGATGAGAAGAGCTGATTGTAATGCTAAGTTGGAAAGATGGGAAGCTTCAATAGCAGACTATGAGATCTTGTTAAGAGGGACACCAGAAGACGAGGAAGTAAATCGGGCATTGTTGGAGGCTCGTGTACAACTTAAGAAACAAAGAGGTGGATGA 1800 0.4194 MKKMGDHSPERKVGCGLITNVFGFGRHSIWPRKTSSANSLPLPSNAANDQKRRRSASNEVVYVDPPSRNTSTPRSVSKPTCASNNNTTNNNNNNPPRRNQHQTTMAMPRVVPVHVPSKASISPSTQGYVNQGRRVQKEAIGISGELESMINDHQKSKGSGNLVRASSGNVMLFGNLGNIRQGDKNDSYSIAMDNYNQYFENSNSNGGGGGHKKKNVVSISNETKPPMNSGGGSLCRAISTRMDPEQLKIMGNEDYKNGRFAEALALYDAAISIDPKKASYRSNRSAALTGLGRLLEAVFECREAIQIDPHYHRAHHRLGNLHLRLGETDKALYHYKQAGPEADPDEVAKVKILQAHLNKCTEARRLGDWNTLITEASNTISSGADSAPQIFALQAEALIKLRRHHDADNVMSKGPNFDVDDCTKFFGPIGNANLLVTRAQVDLAAGRFDDALEAAQKAARLDSNNKAAMKVLRKARAVTAARGRGNDLFKASKFSEACIAYGEGLENDPCNAVLLCNRAACRLKLGQLEKAVEDCCAALSLRPSYTKARMRRADCNAKLERWEASIADYEILLRGTPEDEEVNRALLEARVQLKKQRGG* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2093 599 MobiDBLite consensus disorder prediction 62 99 - -
Psa5g2093 599 SUPERFAMILY TPR-like 244 466 IPR011990 GO:0005515
Psa5g2093 599 Gene3D Tetratricopeptide repeat domain 242 598 IPR011990 GO:0005515
Psa5g2093 599 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 597 IPR044534 -
Psa5g2093 599 MobiDBLite consensus disorder prediction 34 51 - -
Psa5g2093 599 Pfam TPR repeat 251 288 - -
Psa5g2093 599 ProSiteProfiles TPR repeat profile. 244 277 IPR019734 GO:0005515
Psa5g2093 599 SUPERFAMILY TPR-like 480 595 IPR011990 GO:0005515
Psa5g2093 599 SMART tpr_5 432 465 IPR019734 GO:0005515
Psa5g2093 599 SMART tpr_5 244 277 IPR019734 GO:0005515
Psa5g2093 599 SMART tpr_5 512 545 IPR019734 GO:0005515
Psa5g2093 599 SMART tpr_5 312 345 IPR019734 GO:0005515
Psa5g2093 599 SMART tpr_5 278 311 IPR019734 GO:0005515
Psa5g2093 599 SMART tpr_5 546 579 IPR019734 GO:0005515
Psa5g2093 599 SMART tpr_5 478 511 IPR019734 GO:0005515
Psa5g2093 599 PANTHER OS01G0616333 PROTEIN 5 597 - -
Psa5g2093 599 MobiDBLite consensus disorder prediction 34 99 - -
Psa5g2093 599 Pfam Tetratricopeptide repeat 314 344 IPR019734 GO:0005515
Psa5g2093 599 ProSiteProfiles TPR repeat profile. 432 465 IPR019734 GO:0005515
Psa5g2093 599 Pfam Tetratricopeptide repeat 523 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2093 Psa-Chr5 162701511 162704768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2093 292 587 Glycosyltransferase AT3G04240 23.270 3.48e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2093 - - gmx:100811282 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2093 5 162701511 162704768 Psa5g2093 5 162701511 162704768 ECH