Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa5g2092 | ATGGCAAACCCAACTCTTCTCTTCACTCTCCTCTTTCTACTATCATTTTTCTTCGCCACAACCGTTACATCCGACGAGGACTGTGTCTACACGGTGTACGTTAGAACCGGGTCGATCCTCAGGGCAGGAACAGACTCAAACATCATTCTCACCTTGTACAATGCAAAAGGGTACGGCATAAAAATCAACAACCTTGAAGCATGGGGCGGGTTAATGGGTCCGGGTTACAACTACTTTGAGCGGGGCAACCTTGATATATTCAGTGGTAGAGCTCCTTGTTTGGATGGACCCGTTTGCCAGATGAACTTGACTTCAGACGGGTCGGGTGATCATCACGGTTGGTATGTTAATTACGTTGAGGTTACTACAACTGGGGTCCACTCTCCATGTGCTCAGAAGCTCTTCACGGTGGAACAGTGGCTGGCCACCGACACGTCGCCGTATGAGCTTTCTTTTGTTACGAACAACTGCCCGAATACGTTGGGTCAGGCCGAGGCGAAACTGAAGGCCGTTGATGCAGTCAGATCCGGGTCTGGGTCTGGGTCTGATTTCTCTATATTGGGCTCCACCGTGCGCGTGTAG | 582 | 0.5052 | MANPTLLFTLLFLLSFFFATTVTSDEDCVYTVYVRTGSILRAGTDSNIILTLYNAKGYGIKINNLEAWGGLMGPGYNYFERGNLDIFSGRAPCLDGPVCQMNLTSDGSGDHHGWYVNYVEVTTTGVHSPCAQKLFTVEQWLATDTSPYELSFVTNNCPNTLGQAEAKLKAVDAVRSGSGSGSDFSILGSTVRV* | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa5g2092 | 193 | PANTHER | - | 1 | 193 | - | - | |
| Psa5g2092 | 193 | CDD | PLAT_plant_stress | 28 | 156 | - | - | |
| Psa5g2092 | 193 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 29 | 146 | IPR036392 | GO:0005515 | |
| Psa5g2092 | 193 | Pfam | PLAT/LH2 domain | 30 | 149 | IPR001024 | GO:0005515 | |
| Psa5g2092 | 193 | ProSiteProfiles | PLAT domain profile. | 28 | 155 | IPR001024 | GO:0005515 | |
| Psa5g2092 | 193 | Gene3D | PLAT/LH2 domain | 19 | 150 | - | - | |
| Psa5g2092 | 193 | PANTHER | PLAT-PLANT-STRESS PROTEIN | 1 | 193 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa5g2092 | Psa-Chr5 | 162666918 | 162668376 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa5g2092 | - | - | gmx:100793024 | 253.832 |