Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2075 ATGGAGTCGCAATCTTCAAGATCTGAATCACAAACAGACCCTCTCAACAACCCAGCCACCAAAATCCCGTTAGACGGACTCTGCCACGAACTTCACTCCCTCCAAGACCTAGCCAACCGCGGCGCGTGGCGTTCCATCATCGACAAAGTCTCACGCGCTAGAGCCCTCTCTCTTCTCCAAAAACCCCACGACCACGTCACCTATCTCGCCTTCAACGCCCTCGCATTCACCAAACTACGTCGTTTCAACGAAGCTTCTTCCGAACTCGATTCCGTCGAAGATCTCGATAGTTCACACTACCAATACGAAACCTACCCTAAAATCTACCCTAATCGTGTCGGATCTATGGTTCCTTTTTCCCTCCGGTGGCTTCACGCCCTAATTCCGATCAAATTAGGTCAACGACAACAAGGAATCGATCGGTTATACGGTCTCCTCGATTTCGTGCGTGAGAAGATTATGACCAAGGAAAACAACAACCTAAGCGATTCGGTTCGTGTTTGGAGAAAAAGAGAGGTTTTTGTTGTGAATTGTATAATTGGTCACCATTTGAGTCACAAAGAGTTTGGTGTTTGTTTAAGCTTGATGAAAAGTTTACTTTCTCGCAATTCTTCTGATCCTTATTTGATTTCACAACTTGGGTATATTCAATTACAAACTGGTGATTTGGAAGGTGCTAAAGCTTCGTTTTTGAAAGCTGAAGTTGATGGGAAGAACAATGGGTCATTGAGTGAGGTTGAGTTTATGAATCTTGTGAATAGAAACAAGGCTTTGGTGTATATGGTTGGGAAGGATTATGTATCTGCGGTGAGGGAATATGAAGAGTGCATTGTAAGGGATCATACTGATATAGTGGCTTTTAACAATAAAGCTCTTTGTTTGATGTATTTGAGGGATTTGTCTGATTCAATCAAGGTGTTGGAAAATGCTCTGGAAAGGGTTCCTACGGTTGCGCTCAATGAGACCCTTGTTGTTAATTTGTGTAGTATGTATGAGTTGGCTTATGTGAATCACTCGGATATTAAGAGAACACTTAGTAGTTGGATTGCTCGTGTTGCTCCGGATGATTTTGATGCGACGTGTACTCGGACATGA 1095 0.4338 MESQSSRSESQTDPLNNPATKIPLDGLCHELHSLQDLANRGAWRSIIDKVSRARALSLLQKPHDHVTYLAFNALAFTKLRRFNEASSELDSVEDLDSSHYQYETYPKIYPNRVGSMVPFSLRWLHALIPIKLGQRQQGIDRLYGLLDFVREKIMTKENNNLSDSVRVWRKREVFVVNCIIGHHLSHKEFGVCLSLMKSLLSRNSSDPYLISQLGYIQLQTGDLEGAKASFLKAEVDGKNNGSLSEVEFMNLVNRNKALVYMVGKDYVSAVREYEECIVRDHTDIVAFNNKALCLMYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCTRT* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2075 364 SMART tpr_5 250 283 IPR019734 GO:0005515
Psa5g2075 364 SMART tpr_5 284 317 IPR019734 GO:0005515
Psa5g2075 364 SMART tpr_5 66 99 IPR019734 GO:0005515
Psa5g2075 364 SMART tpr_5 207 239 IPR019734 GO:0005515
Psa5g2075 364 Gene3D Tetratricopeptide repeat domain 177 345 IPR011990 GO:0005515
Psa5g2075 364 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 8 363 - -
Psa5g2075 364 SUPERFAMILY TPR-like 198 318 IPR011990 GO:0005515
Psa5g2075 364 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 8 363 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2075 K20309 - gmx:100779691 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2075 5 159877988 159880120 Psa5g2075 5 159877988 159880120 ECH