Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2058 ATGAACGCCTACATTGTCGGCCTCATTGTTCCCCTCGTCATACTCCTCTTCAGAAACTCCACCAACCGCAAACGCCGTGGCTCACCTACCGATGTCGGAGGCGATCCCGGATACACTGTCCGCAACCACCGCTTCGCTTCCGTGCTTAGTTCCGCTTGGGAAGACGTCACCACTCTCGCGGAGATGTTTGAGCATTCATGCAGGGCGCATCATGGTAAACTGTTACTCGGGACGCGTGAATTCATTTCTAGAGAAATGGAGATTTCTTCTGATGGAAGAACGTTTGAGAAGCTTCATCATGGGGAGTATAAATGGGTTACCTATGGAGCTGTTTTTGAATCTGTTTCTAATTTTGCTTCTGGTTTAGCCAATATTGGGCACGTTAGAGAAGAACGTGCTGCGATTTATGCTGAGACTAGAGAAGAGTGGTTTATTGCATTGCAGGCTTGTTTCAGGAGAAATGTGACGGTTGTGACAATGTATGCTTCGTTGGGAGAGGAGGCTTTGTGCCACTCATTGAACGAGACAGAGGTTACAACTGTGATTTGTGGGCGCAAAGAATTGAAATCACTAGTGCATATTTCCGGACAGCTTGACTTCGTGAAACGTGTGATATGTATTGACAACGATGTTCCATCTGATGCCTCATCTGCTCAGCATGGATGGACAATCACTTCCTTTTCTGATGTTGAGAAGCTTGGTAGAGAAAACCCTGTTGCGGCTGATTTACCCCTTTCAGCTGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGCTTGCCTAAGGGTGTGATGATGACACATGGAAATATTGTATCAACAGTGTCTGCTGTAATGACAATTATTCCTAACATTGGGAAAAATGATGTATATCTAGCATACTTACCAATGGCTCATATCCTTGAATTAATAGCCGAGAATTTACTTCCAGCTGTTGGAGGCTCTATAGGATACGGAACTCCTTTGACTCTAACCGATACATCGAACAAGGTAAAGAAGGGGACAAAGGGGGATGCCAGTGCATTAATGCCAACTCTGATGGCATCTGTACCAGCAATTCTTGATCGTGTACGTGATGGAGTTTTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGAAGTTGTTTGATTTAGCCTATGCACGAAGGTTGCGGGCAATTAATGGTAGCTGGTTTGGTGCTTGGGGATTGGAAAAAGTTCTATGGAATTTTTTTGTGTTCAAAAAAGTCCAAGCAATTATGGGTGGTCGTATTCGTTATATACTATGTGGTGGTGCACCTCTTTCTGCTGACACACAAAGATTCATCAATATTTGTCTTGGTGCTCCAATAAGTCAAGGATATGGTCTCACGGAGACTTGCGCTGGTGGGGCATTCTCTGATTTTGACGATACATCTGCTGGCCGTGTTGGACCACCTATTCCTTGCTCATATATCAAGCTAGTTGACTGGCCTGAAGGTGGATACTCAACTACTGACTCACCAATGCCTCGTGGTGAAATAGTAATTGGTGGTGCAAATGTCACTCCTGGATATTTCAAAAATGAAGAAAAGACAAGAGAATCTTACAAGGTTGATGAACGAGGAGTAAGGTGGTTCTACACCGGTGACGTAGGGAGATTTCATGCAGACGGGGTCCTTGAGATCATTGATAGGAAAAAGGACATAGTTAAATTGCAGCATGGAGAATATGTGTCCTTAGGAAAGGTTGAGGCAGCTCTTCTTGTCAGCCCCTTTGTAGACAACATTATGTTGTATGCTGATTCTTTTCAAACTTACACTGTGGCACTTGTGGATGTTTCTCATTCTGCATTGAGTGAATGGGCTTCCAAGCAAGGGATTGCTTATTCTGATCTTTCAGAACTGTGCCAGAAAGAAGAAGCAGTGAAGGAGGTGCATGCATCACTTCTAAAGGAAGCAAAGAAGGCTCGTCTGGAAAAATTCGAGACTCCTGCAAAAGTTAAATTGCTTTCTGATCCCTGGACTCCAGAGACTGGCCTAGTCACTGGAGCCCTTAAGATCAAGAGAGATATCATTAGAAAGACTTTTCAAGAAGAGCTCTCAAAGTTATATGGCAAGTAG 2085 0.4384 MNAYIVGLIVPLVILLFRNSTNRKRRGSPTDVGGDPGYTVRNHRFASVLSSAWEDVTTLAEMFEHSCRAHHGKLLLGTREFISREMEISSDGRTFEKLHHGEYKWVTYGAVFESVSNFASGLANIGHVREERAAIYAETREEWFIALQACFRRNVTVVTMYASLGEEALCHSLNETEVTTVICGRKELKSLVHISGQLDFVKRVICIDNDVPSDASSAQHGWTITSFSDVEKLGRENPVAADLPLSADVAVIMYTSGSTGLPKGVMMTHGNIVSTVSAVMTIIPNIGKNDVYLAYLPMAHILELIAENLLPAVGGSIGYGTPLTLTDTSNKVKKGTKGDASALMPTLMASVPAILDRVRDGVFKKVNAKGGLSKKLFDLAYARRLRAINGSWFGAWGLEKVLWNFFVFKKVQAIMGGRIRYILCGGAPLSADTQRFINICLGAPISQGYGLTETCAGGAFSDFDDTSAGRVGPPIPCSYIKLVDWPEGGYSTTDSPMPRGEIVIGGANVTPGYFKNEEKTRESYKVDERGVRWFYTGDVGRFHADGVLEIIDRKKDIVKLQHGEYVSLGKVEAALLVSPFVDNIMLYADSFQTYTVALVDVSHSALSEWASKQGIAYSDLSELCQKEEAVKEVHASLLKEAKKARLEKFETPAKVKLLSDPWTPETGLVTGALKIKRDIIRKTFQEELSKLYGK* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2058 694 Gene3D - 47 553 IPR042099 -
Psa5g2058 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 694 - -
Psa5g2058 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Psa5g2058 694 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
Psa5g2058 694 Pfam AMP-binding enzyme 100 561 IPR000873 -
Psa5g2058 694 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 10 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2058 Psa-Chr5 158798725 158804276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2058 19 692 Acyl Lipid Metabolism Gene Families AT2G04350 62.389 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2058 K01897 - gmx:100778889 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2058 5 158798725 158804276 Psa5g2058 5 158798725 158804276 ECH