Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2023 ATGGGCTGCGGGGGCTCCAAGGTGGAGGAGTTCCCCGTGGTAACTCTTTGCCGAGAAAGAAAACAGTTTCTCAAAAACGCCTCCGATCAACGCTACGCTCTAGCCGTCGCGCATGTCGCTTATATGCAATCCCTCAAAGATATCGGCGAAGCTCTTCGGAAATTCTCCGATCGGGATCTCTTTCTTCCGACAACTTCTACTTCTTCTTCATCTTCGTTTTCTTCCCCTGTTCTCACATTGCCTTCACATGAAGGTAAATCAAAAGATGGTAGTAGCCATCACATTTCGTCTTCTTCACCTTCCCACGATGGTTCTGGTTCTCACTTGCATCTTTCTTCTGGATCCGAGGTAAGTTCTCCTTCTCCAGATCATATTCATGATCATCGAACACCCGAGCCTCAATACGAACCTGGACCCGAACCCGAACCAGAGCAACCTTCATCTTCGAACGGGTATAACTATCCATTTCCGTATCCGTATCCGTATCAACAAGATTGGACTCAAACTCAACCAGGGGTTAATAATTATGCATATTATATGAAGAAATCTGCACCTCGTGGAAAATCTATGATCTATCAAGAACCAGAGAATCGCGTGGCAGAATCAGGACAATGGACTGGTTCTCCTTATGGTTATGGTTATGCTGGTATGAACGGGAATGCTGGTGGTTATTATGGTTTTCCGGCGGGGCCTTCGTCTTCTCCGACTCCACCTCCTCCGCCTCCTGCTCCACCTTCGCCCCCACGAGTCTCCACTTGGGATTTTCTGAATTTTTTTGAGGCTGTTGATAATGGTTATTCAGGTTATGGAAATTACAGATCAGGGTTAGGGTTAGCGTCGAGTGCGAGTAGTCCTGATTCGAAAGATGTGAGGGAGAGGGAAGGGATTCCTGAACTAGAAGATGAAACCGAACAGGAAACGGTGGAGGTGAAGGAGGTGAAGGAGGCTAGTTACGAGAAGAAGAAGAAAGTGGAGGAGAAAGAGGAAAAGGAAGAGATTGATAAAGGTAGAGATTTTGGTGAAGGAACTTCGAATTCGAAAGAAGTGCCAATGCAACAGGTGAGTAGTAGTGAGGGAAGTTCGAAAACAGTGCGGTTTCATACTAGCGAAAGTAGTGGTGGTTCCAGTTCTTCTATTGAAAAAAAGAGTCCTGATAGTGTTGTTTCTAAAGGGTCTCCTAGAAAGAAGGGTGTGAGTTTTGAGATTGAGGGTGATGAAGCTGCAACTGTTACCACTGTGGAGATTGATGGCGAGGGTTCTATTTTGAGTAGCTTAACCGCTTTGTCTCCACATGGAACTAGGGATCTTAAAGAGGTTGTTAGAGAAATTAGAGATGAGTTTGAGACTGCTTCTAATCATGGAAAAGAGGTTGCGTTTCTTCTCGAGGCTTGCAAACCACCTTATCAGTCAAGGGTTGCTGCATTTAGAGTTATCTTATCAAGGATCTTGCAGATGCTAGCACCTTCTGGGCCACCTTCACATCCTCCATCTGGGCCACCGATACATTTTTCTTCTAGGACAATGAAATTGGCAAAAGCATACTGTGGAGAGCCTGAGAAAGAGTTAATCTCAAATCCGATCAACCTTTCATCTACATTGGAGAAACTTTATGCATGGGAAAAGAAATTGTACAAGGAAGTTAAGGATGAAGAGAGGTTAAGAGCCATTTACGAGAAACAGTGCAAGAGATTGAAAGCATTGGATGATCGAGGAGCTGAATCTACCAAACTAGATGCTACCGAGACATCAATAAGAAAGTTGCTGACAAAAATAAACATTTGCATCAGAAGTGTTGAAAAAATATCAGTCAGGATACATAAATTGAGGGACGAGGAATTGGAGCCTCAGCTTGCGGCATTAATTACCGGATTGATAAGAATGTGGAAATTCATGTTCCAATGCCACCAGAAGCAGTTCCAGGTTATCATGGAGAGTAAAACTCAATCTCTCAAGTTAAACACAGGTTTGCAAAGAGATGAAGGCTTGAAAGCCATTATGGAACTTGAAAGGGAGCTTTTGAAGTGGTGCACTCAGTTCAACAATTGGGTTGGGACCCAAAAATCTTATGTTGAAAACTTGAATGGGTGGCTCATAAGGTGCCTTCATGATGAACCTGAAGAAACAGCCGATGGTGTTGTCCCTTTCTCTCCAAGTAGGATAGGAGCTCCACCAGCTTTCATAATCTGCAACGATTGGCAGCAAGCAATGAATAGAATTTCAGAAAAAGAGGTGGCGGAAGCTATGGGCGAGTTTGCTCAAAAACTGCATGAGCTATGGGAGAGGCAAGATGAAGAACAAAGGAGGAAAATCAGGGCGGAGTATCTCACCGAGGATTTTGAAAAACAACTTAAAGCTTTGCGCACCGAAATGGGAAGCTCAAAACAGAAGCATTGCGAACTTTCAGGAAAGACTAAATTGTCGAAGTTCACTTCTGATAGTGGTGTTTCACCACTAGATGATCTAAAGGTGGATTTAGATTCTATGAAGAAGAGACTGCATGAAGAGAGGGCCAGACATAAAGAAGCCATTAGGCTTGTTCGCGATGCAGCTTCGAATAGTTTACAAACTGGTTTGATTCCCATTTTTAAGACATTAGAAAGTTTCACGTCAGAGGTGGTGAAAGCTCATGAGCAAGTCAGACTTCAAAACACCGCGGCCTCATAG 2664 0.4388 MGCGGSKVEEFPVVTLCRERKQFLKNASDQRYALAVAHVAYMQSLKDIGEALRKFSDRDLFLPTTSTSSSSSFSSPVLTLPSHEGKSKDGSSHHISSSSPSHDGSGSHLHLSSGSEVSSPSPDHIHDHRTPEPQYEPGPEPEPEQPSSSNGYNYPFPYPYPYQQDWTQTQPGVNNYAYYMKKSAPRGKSMIYQEPENRVAESGQWTGSPYGYGYAGMNGNAGGYYGFPAGPSSSPTPPPPPPAPPSPPRVSTWDFLNFFEAVDNGYSGYGNYRSGLGLASSASSPDSKDVREREGIPELEDETEQETVEVKEVKEASYEKKKKVEEKEEKEEIDKGRDFGEGTSNSKEVPMQQVSSSEGSSKTVRFHTSESSGGSSSSIEKKSPDSVVSKGSPRKKGVSFEIEGDEAATVTTVEIDGEGSILSSLTALSPHGTRDLKEVVREIRDEFETASNHGKEVAFLLEACKPPYQSRVAAFRVILSRILQMLAPSGPPSHPPSGPPIHFSSRTMKLAKAYCGEPEKELISNPINLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQCKRLKALDDRGAESTKLDATETSIRKLLTKINICIRSVEKISVRIHKLRDEELEPQLAALITGLIRMWKFMFQCHQKQFQVIMESKTQSLKLNTGLQRDEGLKAIMELERELLKWCTQFNNWVGTQKSYVENLNGWLIRCLHDEPEETADGVVPFSPSRIGAPPAFIICNDWQQAMNRISEKEVAEAMGEFAQKLHELWERQDEEQRRKIRAEYLTEDFEKQLKALRTEMGSSKQKHCELSGKTKLSKFTSDSGVSPLDDLKVDLDSMKKRLHEERARHKEAIRLVRDAASNSLQTGLIPIFKTLESFTSEVVKAHEQVRLQNTAAS* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2023 887 MobiDBLite consensus disorder prediction 121 135 - -
Psa5g2023 887 MobiDBLite consensus disorder prediction 92 120 - -
Psa5g2023 887 PANTHER FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED 1 884 - -
Psa5g2023 887 PANTHER UNCHARACTERIZED 1 884 - -
Psa5g2023 887 MobiDBLite consensus disorder prediction 65 148 - -
Psa5g2023 887 Coils Coil 296 330 - -
Psa5g2023 887 MobiDBLite consensus disorder prediction 345 385 - -
Psa5g2023 887 Coils Coil 818 845 - -
Psa5g2023 887 MobiDBLite consensus disorder prediction 228 249 - -
Psa5g2023 887 MobiDBLite consensus disorder prediction 65 81 - -
Psa5g2023 887 MobiDBLite consensus disorder prediction 307 342 - -
Psa5g2023 887 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Psa5g2023 887 MobiDBLite consensus disorder prediction 279 400 - -
Psa5g2023 887 MobiDBLite consensus disorder prediction 231 249 - -
Psa5g2023 887 Pfam Protein of unknown function (DUF632) 436 756 IPR006867 -
Psa5g2023 887 Coils Coil 547 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2023 Psa-Chr5 156140673 156146112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2023 240 772 Acyl Lipid Metabolism Gene Families AT2G27090 27.957 4.69e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2023 - - aprc:113852495 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2023 5 156140673 156146112 Psa5g2023 5 156140673 156146112 ECH