Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2019 ATGGTGCTAGCCAAAAAAGCCATTCGCTGTCTTTCAAAATCATACAAATCCTTCATCAAAATTTGGTTACGCCGAAAAACATCGTCATCCCCAATCGATGCTAAACCATCGCGCCCCAAACAAATTCAGCAGGAATCTGTTGTAGATGACAAATCGGGTGAACATACGAATGTAATTCGCAACACGGGATTGAATGCAAATGCATTAAGAGAGAAGAATATAATGATGAGTTCAAGATTAGGATGTTGTTTATTTAGGCATAGAAGCTTAGGAAATTCACGTTTACCTTCCAATTCGATGGCTTCTACGTCAAGAAACAACTCAATTAACAGAAAGAGGGATAACCACAAGAGAAGCAAGAGCGTCGAAAGCTTTGCTAATTTTGTACCTCCCCCTTATTTATTGAATACTAGCGGCAGTTTCCAAATGCCTACTCGTATGCCGTCAAGAAATGGTAGTCGTAAAAGTGGAGCTCCGATCATGTATTCCAATTCATCAGGAATGCTAAAACCACCACCAATTGAGAAAACTCTCGAATGCACCCTTGAAGAGTTGTGTTATGGTTGCACGAAAAAGGTCATGATCACGAGAGATGTCCTAACAGATACCGGAAGTGTTGTTAAAGAGGAGGAACAATTAACAATAAATGTAGAACCCGGATGGAAGAAAGGAACAAAGATAACATTCGTAGGCAAAGGGAATATGAGGCCTAATGCATACCAAGAAGACATAGTATTTCATGTATCTGAGAAGGGACACCAACTTTTCAGAAGAGAAGGGGATGATTTGGCATTATGTTTAGAAATTCCCTTAATAAAAGCACTTACTGGGTGTACAATATCAGTTCCATTGTTGGGTGGAGATCATATGAATTTGACGGTAGATGATGTTATATATCCTGGCTATCAGAAGATTGTCACTGATCAAGGTATGTCAATCTCTAGAGAATCAGGGAAGAGAGGAGACTTAAGAATTACATTTCTTGTTGAGTTTCCAACACATCTTACAGATAATCAAAGATCTGATGTTTTTGGTATTTTACAGAATTCTTGTTAA 1056 0.3854 MVLAKKAIRCLSKSYKSFIKIWLRRKTSSSPIDAKPSRPKQIQQESVVDDKSGEHTNVIRNTGLNANALREKNIMMSSRLGCCLFRHRSLGNSRLPSNSMASTSRNNSINRKRDNHKRSKSVESFANFVPPPYLLNTSGSFQMPTRMPSRNGSRKSGAPIMYSNSSGMLKPPPIEKTLECTLEELCYGCTKKVMITRDVLTDTGSVVKEEEQLTINVEPGWKKGTKITFVGKGNMRPNAYQEDIVFHVSEKGHQLFRREGDDLALCLEIPLIKALTGCTISVPLLGGDHMNLTVDDVIYPGYQKIVTDQGMSISRESGKRGDLRITFLVEFPTHLTDNQRSDVFGILQNSC* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2019 351 SUPERFAMILY HSP40/DnaJ peptide-binding domain 256 341 IPR008971 GO:0006457|GO:0051082
Psa5g2019 351 CDD DnaJ_C 172 335 - -
Psa5g2019 351 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 7 348 - -
Psa5g2019 351 MobiDBLite consensus disorder prediction 94 120 - -
Psa5g2019 351 SUPERFAMILY HSP40/DnaJ peptide-binding domain 173 253 IPR008971 GO:0006457|GO:0051082
Psa5g2019 351 MobiDBLite consensus disorder prediction 94 108 - -
Psa5g2019 351 Gene3D - 253 333 - -
Psa5g2019 351 PANTHER FAMILY B PROTEIN, PUTATIVE-RELATED 7 348 - -
Psa5g2019 351 MobiDBLite consensus disorder prediction 29 51 - -
Psa5g2019 351 Gene3D - 170 251 - -
Psa5g2019 351 Pfam DnaJ C terminal domain 174 332 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2019 Psa-Chr5 155961408 155962720 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2019 K09519 - gmx:100782604 379.793