Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2017 ATGGCTAAAATCGTTTCGATTTTCGGTTTTTTGTTCTCTCTTCTTGTGTTGCTTCCTTCTCAGATCTCCGCTGAGGAATCAGAGGCCAAGGAATCCGTCCTCACATTGGATAACACCAATTTCCATGACACTGTCACCAAGCACGAATTCATCGTCGTCGAGTTTTATGCCCCTTGGTGTGGTCACTGTAAGCAGCTTGCCCCAGAGTATGAAAAAGCTGCTTCTATCTTGAGCAGTCTTGAAACTCCAATTGTTTTGGCTAAAGTTGATGCCAATGAGGAGAAGAACAAGGAACTTGCGTCTGAATATGAAGTTAAGGGATTCCCAACAATTAAGATTTTGAGGAATGGTGGAAAAAACATTCAAGAATACAAAGGTCCCCGCGAAGCTGATGGTATTGTCGAATACTTGAAGAAACAAAATGGACCTGCTTCAACAGAAATTAAATCTGCTGATGAAGCCAGTGCTTTTATTGGTGATAAAAAAATTGTTGTTGTTGGAGTTTTCCCAAAATTCTCTGGGGAGGAGTATGATAACTTCCTTGCATTAGCAGATAAGTTGCGTGCTGACTATGACATTGCTCACACCTTGGATGCCAAATACCTCCCAAGGGGAGATTCATCTGTGTCCGGCCCTGTAGTTAGGTTATTTAAGCCATTTGACGAGCTCTTTGTTGACTCCAAGGATTTCAATGTTGAAGCTTTAGTGAAATTTGTTGAAGAATCCAGTATTCCCCTTGTGACTATCTTCAACAATGAACCAAGCAATCACCCTTTTGTTGTCAAATACTTTAACTCTCCCAATGCAAAGGCAATGTTGTTCGTCAACTTCACTTCTGCAAGTACTGAAGCTTTTAAGGCAAAATACCGTGAAATTGCCGAGCAATACAAACAACAGGGAATTAGCTTTCTTATCGGAGATGTTGAGTCCAGCCAAGGTGCCTTCCAGTATTTTGGACTTAAGGAAGACCAAGTACCTCTAATTATTATTCAGCATACTGATGGCAAGAAATTTTTCAAGCCCAATTTGGAACCAGATCACCTTGCAGCTTGGTTGAAGGCATACAAGGATGGAGATGTTGCTCCATTTGTCAAGTCTGAACCTATCCCTGCGACTAACAACGAACCTGTTAAAGTGGTAGTTGGGGAAACTCTTCAAGAAATAGTTTTCAACTCTGGGAAGAATGTTTTGCTTGAGTTTTATGCCCCTTGGTGTGGTCACTGCAAATCATTGGCTCCAATCTTGGACGAAGTTGCTGTCTCATTTCAAAGTGATCCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAACGATATCCCAAGCGATACCTTTGAGGTTCAAGGTTATCCCACTTTGTACTTCAGGTCAGCAAGTGGAAAGGTATCACAATACGACGGTGGTAGGACAAAGGAAGACATCATTGAATTCATTCAAAAGAACAAGGACACAACTGGTGCTGCTCAGCAAGAAGTTGAACAGCCAAAAGCTCCTGCTCAGCAAGAAGTAGAACAACCTAAAGATGAGCTTTGA 1533 0.4175 MAKIVSIFGFLFSLLVLLPSQISAEESEAKESVLTLDNTNFHDTVTKHEFIVVEFYAPWCGHCKQLAPEYEKAASILSSLETPIVLAKVDANEEKNKELASEYEVKGFPTIKILRNGGKNIQEYKGPREADGIVEYLKKQNGPASTEIKSADEASAFIGDKKIVVVGVFPKFSGEEYDNFLALADKLRADYDIAHTLDAKYLPRGDSSVSGPVVRLFKPFDELFVDSKDFNVEALVKFVEESSIPLVTIFNNEPSNHPFVVKYFNSPNAKAMLFVNFTSASTEAFKAKYREIAEQYKQQGISFLIGDVESSQGAFQYFGLKEDQVPLIIIQHTDGKKFFKPNLEPDHLAAWLKAYKDGDVAPFVKSEPIPATNNEPVKVVVGETLQEIVFNSGKNVLLEFYAPWCGHCKSLAPILDEVAVSFQSDPDVVIAKLDATANDIPSDTFEVQGYPTLYFRSASGKVSQYDGGRTKEDIIEFIQKNKDTTGAAQQEVEQPKAPAQQEVEQPKDEL* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2017 510 SUPERFAMILY Thioredoxin-like 343 484 IPR036249 -
Psa5g2017 510 PRINTS Thioredoxin family signature 51 59 - -
Psa5g2017 510 PRINTS Thioredoxin family signature 59 68 - -
Psa5g2017 510 PRINTS Thioredoxin family signature 104 115 - -
Psa5g2017 510 CDD PDI_a_family 34 137 - -
Psa5g2017 510 ProSitePatterns Thioredoxin family active site. 397 415 IPR017937 -
Psa5g2017 510 SUPERFAMILY Thioredoxin-like 148 253 IPR036249 -
Psa5g2017 510 Gene3D Glutaredoxin 371 486 - -
Psa5g2017 510 Gene3D Glutaredoxin 20 140 - -
Psa5g2017 510 Pfam Thioredoxin-like domain 169 353 - -
Psa5g2017 510 ProSiteProfiles Thioredoxin domain profile. 18 142 IPR013766 -
Psa5g2017 510 ProSitePatterns Thioredoxin family active site. 52 70 IPR017937 -
Psa5g2017 510 Gene3D Glutaredoxin 141 245 - -
Psa5g2017 510 Gene3D Glutaredoxin 246 370 - -
Psa5g2017 510 PANTHER PROTEIN DISULFIDE ISOMERASE 13 498 - -
Psa5g2017 510 TIGRFAM ER_PDI_fam: protein disulfide isomerase 31 510 IPR005792 GO:0003756
Psa5g2017 510 SUPERFAMILY Thioredoxin-like 242 374 IPR036249 -
Psa5g2017 510 MobiDBLite consensus disorder prediction 485 510 - -
Psa5g2017 510 CDD PDI_b'_family 260 356 - -
Psa5g2017 510 Pfam Thioredoxin 377 480 IPR013766 -
Psa5g2017 510 Pfam Thioredoxin 33 139 IPR013766 -
Psa5g2017 510 TIGRFAM pdi_dom: protein disulfide-isomerase domain 37 140 IPR005788 GO:0003756
Psa5g2017 510 TIGRFAM pdi_dom: protein disulfide-isomerase domain 381 481 IPR005788 GO:0003756
Psa5g2017 510 SUPERFAMILY Thioredoxin-like 31 143 IPR036249 -
Psa5g2017 510 CDD PDI_b_family 145 241 - -
Psa5g2017 510 PANTHER PROTEIN DISULFIDE-ISOMERASE 13 498 - -
Psa5g2017 510 CDD PDI_a_PDI_a'_C 376 478 - -
Psa5g2017 510 ProSiteProfiles Thioredoxin domain profile. 355 483 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2017 Psa-Chr5 155808306 155811759 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2017 K09580 - gmx:100170705 831.247