Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2009 ATGATTTCGTTGATCTTGCAGGTGAGAATAACGATGAAGAGAAAAAGATCCCCCAAACCGCTACCTCCTCTACCTTCAACCCCTCCAACACCCCAAACCCAATCCCGCCACTCCACCAACCTCTCCAAATCCCGCCTATGGATCCCTCTCAACCTAACCCGACAAGAGCTCTCACTACCCCTCACCTTCCCCACCGGTCAAACATTCCGATGGAAAAACACCGCTCCTTTCCAATACACAGGCGTCGTCGGATCCCACCTCATATCCCTCAAACACCTCCAAAACGGCGACGTTTGCTTCTCCCTTCACTCCCAATCCCATTCCAACCACGATGCCAAAACGGCATTGCTCGATTTCTTAAACGCAGACGTTTCTCTCGCTGACACGTGGGAGGTTTTCTCGGCTTCCGATGAAAGGTTCGCCGAATTAGCGCAACATTTGGGTGGTGCTAGGGTTTTGAGACAAGATCCCTTTGAGTGCTTGATTCAGTTCATGTGTTCTTCTAATAATCATATTAGTAGAATCACTAAAATGGTTGATTACGTTTCATCTCTTGGGACTTATTTAGGTCATGTTGAAGGCTTTGATTTTCATGCCTTCCCTACTCTTCACCAGCTTTCATTGGTTTCTGAACAACAACTCAGAGAGGCTGGTTTTGGTTACAGGGCTAAGTACATAGTTGGCACTGTAAATGCTTTGCAATCAAAACCTGAAGGTGGAGAAGAATGGCTTTATTCTCTTCGGAAATTGGATCTTCAAGATGTTATATCTCAACTTTCCAAGTTACCTGGAGTCGGTCCTAAAGTGGCTGCTTGCATAGCTCTCTACTCCCTTGATCAACACCATGCAATTCCTGTTGATGTTCATGTGTGGCGGATTGCCCAAAAGTATCTCTTACCTGAGCTTGCAGGTTCCAAGTTGACGCTGAAGCTCTGCAATCGTGTTGCAGAGGCATTTGTAACGAAATATGGTAAATATGCGGGCTGGGCTCAAGCTGTTTTATTTATTGCTGAGTTGCCTTCACAAAAGGCCATCCTACCCTTACATTTGAGGGCTACCAAACAGCCGAAGCCTGCCAAGATAGAAAACAGTGAAGAAGAATCTGAGTGA 1110 0.4613 MISLILQVRITMKRKRSPKPLPPLPSTPPTPQTQSRHSTNLSKSRLWIPLNLTRQELSLPLTFPTGQTFRWKNTAPFQYTGVVGSHLISLKHLQNGDVCFSLHSQSHSNHDAKTALLDFLNADVSLADTWEVFSASDERFAELAQHLGGARVLRQDPFECLIQFMCSSNNHISRITKMVDYVSSLGTYLGHVEGFDFHAFPTLHQLSLVSEQQLREAGFGYRAKYIVGTVNALQSKPEGGEEWLYSLRKLDLQDVISQLSKLPGVGPKVAACIALYSLDQHHAIPVDVHVWRIAQKYLLPELAGSKLTLKLCNRVAEAFVTKYGKYAGWAQAVLFIAELPSQKAILPLHLRATKQPKPAKIENSEEESE* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2009 369 Gene3D Hypothetical protein; domain 2 156 280 - -
Psa5g2009 369 SUPERFAMILY TATA-box binding protein-like 40 155 - -
Psa5g2009 369 Gene3D - 33 121 - -
Psa5g2009 369 MobiDBLite consensus disorder prediction 15 40 - -
Psa5g2009 369 Pfam HhH-GPD superfamily base excision DNA repair protein 162 298 IPR003265 GO:0006284
Psa5g2009 369 PANTHER N-GLYCOSYLASE/DNA LYASE 46 357 - -
Psa5g2009 369 CDD ENDO3c 158 336 IPR003265 GO:0006284
Psa5g2009 369 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 50 161 IPR012904 GO:0003684|GO:0006289|GO:0008534
Psa5g2009 369 SUPERFAMILY DNA-glycosylase 156 337 IPR011257 GO:0003824|GO:0006281
Psa5g2009 369 Gene3D - 130 339 IPR023170 -
Psa5g2009 369 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 46 357 - -
Psa5g2009 369 SMART endo3end 166 338 IPR003265 GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2009 K03660 - gmx:100789749 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2009 5 155498157 155501759 Psa5g2009 5 155498157 155501759 ECH